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. 2024 Feb 26;37(3):465–475. doi: 10.1021/acs.chemrestox.3c00318

Table 2. Overview of the GENOMARK and TGx-DDI Hazard Classifications Based on Gene Expression Data Obtained with TempO-Seqa.

3.2.

a

Chemicals (GLY, MMS, NDMA, 4NQO, AFB1, COL, CPA, MMC, 2CTAC, and EUG) are listed in increasing test concentrations (C1–C4/C5) with their corresponding in vivo genotoxicity data. For GENOMARK, the individual prediction scores of the RF and SVM model are given together with the overall classification result for genotoxicity. A probability result <0.45 is considered nongenotoxic (NGTX) (green), ≥0.45 and ≤0.55 inconclusive (INCONCL) (yellow), and >0.55 genotoxic (GTX) (red). For TGx-DDI, classification, the results of the individual statistical analyses (NSC-PA, PCA, and HC) for direct DNA damaging (DDI, in red) or nondirect DNA damaging (non-DDI, in green) and the overall classification result are provided. *Excluded for transcriptome analysis due to overtly cytotoxic in QA/QC.