TABLE 2.

Number of single cells passing quality control metrics in each single‐cell RNA‐sequencing dataset

First author	GSE #	Disease model	# Cells before QC	# Cells after QC	# QC myeloid cells
Mendiola et al.	GSE146113	EAE	9079	6859	3297
Hammond et al.	GSE121654	LPC‐induced demyelination	5510	5408	5408
Keren‐Shaul et al.	GSE98969	5xFAD transgenic mice	10,146	9636	3958
Keren‐Shaul et al.	GSE98969	SOD1G93A transgenic mice	2820 (day 80 only)	2693	1091
Milich et al.	GSE162610	Spinal cord injury	66,428	54,049	35,518
Somebang et al.	GSE175430	Traumatic brain injury	99,769	90,998	17,097

Abbreviations: 5xFAD, 5 familial AD mutations; EAE, experimental autoimmune encephalomyelitis; LPC, lysophosphatidylcholine; QC, quality control.