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. 2024 Mar 6;10(1):veae018. doi: 10.1093/ve/veae018

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© The Author(s) 2024. Published by Oxford University Press.

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Figure 6. — Summary of the intra-host accumulation of nucleotide variants (NV), using the dataset ancestor as reference. (A) Nucleotide variants per site along the SARS-CoV-2 genome. Relative abundance of NVs is calculated with a sliding window of width 1,000 nucleotides and a step of fifty. Labels indicate the coding regions of the non-structural proteins (NSP) within ORF1ab. (B) Genome variation along the genome for each sample. The y-axis displays samples in chronological order, with the earliest collection date at the bottom and the latest at the top.