Table 4.
Consistency of genotype and phenotype resistance to antimicrobial resistance genes between the Pneumonia panel and the cultural methods
| Tag | CM + PN + | CM + PN− | CM − PN + | CM − PN− | PPA (95%CI) | NPA (95%CI) |
|---|---|---|---|---|---|---|
| CTX-Ma | 27 | 3 | 2 | 14 | 0.9 (0.74–0.97) | 0.88 (0.64–0.97) |
| Carbapenenase AMRb | 24 | 6 | 12 | 4 | 0.8 (0.63–0.9) | 0.25 (0.1–0.49) |
| mecA/C and MREJc | 1 | 0 | 0 | 3 | 1 (0.21–1) | 1 (0.44–1) |
| Overall | 52 | 9 | 14 | 21 | 0.85 (0.74–0.92) | 0.6 (0.44–0.74) |
Data are presented as n
CM cultural method; PN panel Pneumonia panel; AMR antimicrobial resistance; PPA positive percent agreement; NPA negative percent agreement; CI confdence interval
aresistance associated with CTX-M genes
bresistance associated with one or more carbapenenum resistance genes, including (KPC, NDM, Oxa48-like, VIM, IMP)
cresistance associated with mecA/C and MREJ genes