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. 2024 Mar 7;15:1296178. doi: 10.3389/fimmu.2024.1296178

Table 2.

List of oligonucleotides used for mRNA expression analysis in retinae, while Actb and Ppid served as reference genes.

Gene Forward (F) and reverse (R) oligonucleotides GenBank acc. no. Amplicon size
Actb-F
Actb-R
ctaaggccaaccgtgaaag
accagaggcatacagggaca
NM_007393.5 104 bp
C1qa-F
C1qa-R
cgggtctcaaaggagagaga
tcctttaaaacctcggatacca
NM_007572.2 71 bp
C1qb-F
C1qb-R
aggcactccagggataaagg
ggtcccctttctctccaaac
NM_009777.3 80 bp
C1qc-F
C1qc-R
atggtcgttggacccagtt
gagtggtagggccagaagaa
NM_007574.2 75 bp
C3-F
C3-R
accttacctcggcaagtttct
ttgtagagctgctggtcagg
NM_009778.3 75 bp
Cd68-F
Cd68-R
tgatcttgctaggaccgctta
taacggcctttttgtgagga
NM_001291058.1 66 bp
Cfb-F
Cfb-R
ctcgaacctgcagatccac
tcaaagtcctgcggtcgt
M57890.1 112 bp
Hc-F
Hc-R
tgacaccaggcttcagaaagt
agttgcgcacagtcagctt
XM_017315669.2 69 bp
Itgam-F
Itgam-R
cctgtccctggctgtttcta
accggagccatcaatcaaga
NM_001082960.1 208 bp
Masp2-F
Masp2-R
ggcggctactattgctcct
aacacctggcctgaacaaag
NM_001003893.2 86 bp
Nos2-F
Nos2-R
ctttgccacggacgagac
tcattgtactctgagggctgac
NM_010927.4 66 bp
Ppid-F
Ppid-R
aaggatggcaaggattgaaa
ctttaagcaattctgcctgga
NM_026352 95 bp
Tgfb-F
Tgfb-R
aggaggtttataaaatcgacatgc
tgtaacaactgggcagacagttt
XM_006497136.3 65 bp
Tnf-F
Tnf-R
ctgtagcccacgtcgtagc
ttgagatccatgccgttg
NM_013693.3 97 bp

The predicted amplicon sizes are given. F, forward; R, reverse; acc. no., accession number; bp, base pair.