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. 2024 Mar 11;9(11):13284–13297. doi: 10.1021/acsomega.3c10083

Table 4. Comparison of the Polar (Hydrogen Bonds) and Nonpolar Interactions (Hydrophobic, van der Waals Contacts) of Blumeatin and Quercetin (Natural Ligand) with the Residues from the Active Site of XO.

ligand conventional hydrogen bonds, bond lengths (in Å in parentheses), and typesa residues in van der Waals contact or hydrophobic interaction
blumeatin via O atom of Thr1010: 2.70:C=O and 3.26:O–H; via N atom of Thr1010: 2.93:C=O and 2.97:O–H; Val1011 (3.08:C=O); Arg880 (2.03:O–H); Phe914 (3.48:π–π and 4.04:(O–H) π–σ); Phe1009 (π–π); Ala1078 (3.58:O–H and 5.22:π–alkyl); Ala1079 (3.96:π–σ); Leu1014 (3.47:π–σ); Leu873 (4.74:π–alkyl), Leu648 (5.05:π–alkyl), Ala910 (4.37:π–alkyl) Glu802, Asn768, Ser1008, Glu1261, Phe1013, Phe1150, Ser876, Lys771, Thr803
quercetin Arg880, Thr1010, Glu802, Phe914, Ala1079, Phe1009, Leu873, Leu1014, Leu648, Val1011 Ser1008, Phe1150, Ser876, Phe1013, Lys771, Pro1076, Ala1078
a

Bold text denotes mutual residues that are in interaction with both blumeatin and quercetin.