Table 1.

Number of single-nucleotide polymorphisms (SNPs) and individuals in each data set.

SNP set	SNPs after first filtering	SNPs after second filtering	Individuals after filtering
	MAF > 1%, coverage > 5, missing rate<50%	5< coverage <60, missing rate<70%	MASPOT panel
Full	182,757	171,859	755
Non-synonymous	32,352	29,553	755
Synonymous	34,695	31,229	755
Non-coding	33,743	32,388	751
Combination (non-synonymous, synonymous, non-coding)	100,790	93,170	755

Total number of individuals before filtering: 762 in MASPOT panel.