Skip to main content
. 2024 Mar 8;15:1304853. doi: 10.3389/fgene.2024.1304853

TABLE 5.

Melanoma CAF populations, ATAC and scRNA seq data of genes associated with CAFs in melanoma along with genes associated with short-term survival and treatment resistance.

Functional classification Single-cell ATAC-seq markers Single-cell RNA-Seq markers References
mCAF None reported COL1A1, COL1A2, COL3A1,LUM, POSTN,TNC, COL11A1, PTGDS, Acta2, Rock1, Mcl2, Mick, Col1a1, Col1a2, Fn1, Sparc Agnes et al. (2023), Davidson et al. (2020)
iCAF None reported Pdpn, Pdgfra, Cd34, Cxcl12, Csf1, Il6, C2, C3, C4b, Postn, Tnc, Ng2, Zeb2, Acta2, Lrrc15, Fbln1, MMP1, MMP3, IL6,CXCL8, IDO1, MMP1 Davidson et al. (2020), Filipescu et al. (2023), Agnes et al. (2023)
Short-Term Survival or Treatment Resistance FAP, FSP, S100A4, TBF-b CCN2 Wong et al. (2019), Andersen et al. (2004), Kodama et al. (2021) Hutchenreuther et al. (2018)