Table 1. Panel of viruses and bacteria associated with feline respiratory disorders, related pathogens and SARS-CoV-2 variants used to assess the specificity of each qPCR/RT-qPCR assay.
| Pathogens | Reference strain | Source |
|---|---|---|
| Feline Calicivirus (FCV) | VR-782™ | ATCC® |
| SARS-CoV-2 USA-WA1/2020 | NR-52281 | BEI Resources |
| SARS-CoV-2 Alpha (B.1.1.7) | NR-54020 | BEI Resources |
| SARS-CoV-2 Beta (B.1.351) | NR-55282 | BEI Resources |
| SARS-CoV-2 Delta (B.1.617.2) | NR-55671 | BEI Resources |
| SARS-CoV-2 Omicron (B.1.1.529) | NR-56461 | BEI Resources |
| Feline Herpesvirus 1 (FHV-1) | VR-814™ | ATCC® |
| Canine Influenza A (CIV) H3N2 | VLS-1355 | Cornell Universitya |
| CIV H3N8 | A/Ca/FL/15592/04 | Cornell Universityb |
| Bordetella bronchiseptica E014 | NR-44164 | BEI Resources |
| Chlamydia felisEverett et al. | VR-120™ | ATCC® |
| Mycoplasma felisCole et al. | 23391™ | ATCC® |
| Mycoplasma cynos Rosendal | 27544™ | ATCC® |
| Mycoplasma canis | NR-3865 | BEI Resources |
| Feline Coronavirus (FCoV) | L1911562 | LADDLc |
| Feline Infectious Peritonitis Virus (FIPV) | NR-43287 | BEI Resources |
| Feline Panleukopenia Virus (FPlV) | VR-648™ | ATCC® |
aKindly provided by Dr. Diego Diel
bKindly provided by Dr. Edward Dubovi
cLADDL: Louisiana Animal Disease Diagnostic Laboratory, School of Veterinary Medicine, Louisiana State University, Louisiana, Inited States of America