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. 2024 Mar 6;27(4):109435. doi: 10.1016/j.isci.2024.109435
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

β-Tubulin III Abcam Cat# ab78078; RRID: AB_2256751
β-Tubulin III Abcam Cat# ab52623; RRID: AB_869991
β-Tubulin III Sigma Cat# T8660; RRID: AB_477590
DCX Abcam Cat# ab18723; RRID: AB_732011
S100β Abcam Cat# ab52642; RRID: AB_882426
GFAP Cell Signaling Technology Cat# 3670; RRID: AB_561049
GFAP Cell Signaling Technology Cat# 12389; RRID: AB_2631098
SOX2 Cell Signaling Technology Cat# 3579s; RRID: AB_2195767
RBM3 Proteintech Cat# 14363-1-AP; RRID: AB_2269266
SOX11 Millipore Cat# HPA000536; RRID: AB_1080060
SOX11 Abmart Cat# T55823
β-actin Cell Signaling Technology Cat# 4970; RRID: AB_2223172
GFP Abcam Cat# ab13970; RRID: AB_300798
V5 Abmart Cat# M20052
Flag Abways Cat# AB0008; RRID: AB_2943672
MAP2 Abcam Cat# ab5392; RRID: AB_2138153
Anti-Rabbit 488 Cell Signaling Technology Cat# 4412; RRID: AB_1904025
Anti-Rabbit 594 Cell Signaling Technology Cat# 8889; RRID: AB_2716249
Anti-Mouse 488 Cell Signaling Technology Cat# 4408; RRID: AB_10694704
Anti-Mouse 594 Cell Signaling Technology Cat# 8890; RRID: AB_2714182
Anti-Chicken 647 IgY Invitrogen Cat# A-21449; RRID: AB_2535866
HRP-linked anti-Rabbit IgG (H + L) Beyotime Cat# A0208; RRID: AB_2892644
HRP-linked anti-Mouse IgG (H + L) Beyotime Cat# A0216; RRID: AB_2860575
HRP-linked anti-Chicken IgG (H + L) Abcam Cat# ab6877; RRID: AB_955465

Bacterial and virus strains

DH5α Shanghai Sangon Biotechnology Co., Ltd B528413
pLenti-EF1-EGFP-P2A-Puro OBIO Technology (Shanghai) Co., Ltd N/A

Chemicals, peptides, and recombinant proteins

Basic fibroblast growth factor Gibco PHG0367
Epidermal growth factor Proteintech HZ-1326

Critical commercial assays

DMEM/F12 Gibco 10565018
B27 supplement Gibco 17504044
Accutase Gibco A1110501
Lipofectamine 2000 Invitrogen 11668019
neurobasal medium Gibco 21103049
L-GlutaMax Gibco 35050079
polybrene Biosharp Bl628A
4-Thiouridine Sigma T4509
DTT ThermoFisher R0862
RNase inhibitor Sangon Biotech B600478
EDTA-Free Protease Inhibitor Cocktail Bimake B14001
TRIzol Vazyme R401-01
RNase 1 Thermo Scientific EN0601
Protease K Sangon Biotech A610451
RIPA buffer Beyotime P0013B
SDS-PAGE Gel Vazyme E304/305
BCA protein assay kit Sangon C503021
ECL Millipore WBULS0500
HiScript III 1st Strand cDNA Synthesis Kit Vazyme R312-01
ChamQ Universal SYBR qRT-PCR Master Mix Vazyme Q711-02
Actinomycin D MedChemExpress HY-17559
EdU assays kit EpiZyme CX004
Dual-Luciferase Reporter Assay Kit Yeasen 11402ES60
DAPI Ysasen 40727ES10

Deposited data

Single-cell RNA sequencing data This paper GEO: GSE241889
CLIP-RNA sequencing data This paper GEO: GSE241548
Original, unprocessed data This paper Mendeley Data: https://doi.org/10.17632/7527hjwbnv.1

Experimental models: Cell lines

Human neural stem cells Shanghai Angecon Biotechnology Co., Ltd N/A
HEK293T Cell Bank/Stem Cell Bank, Chinese Academy of Sciences (Shanghai, China) CSTR:19375.09.3101HUMSCSP5209

Experimental models: Organisms/strains

BALB/C nude mice Experimental Animal Center of Ren Ji Hospital N/A

Oligonucleotides

siRNA oligo sequence This study, see Table S3 N/A
Primers for qRT-PCR This study, see Table S7 N/A

Recombinant DNA

pMS2 Shanghai Jiao Tong University N/A
pMS2-GST Shanghai Jiao Tong University N/A
pmirGLO Beijing Tsingke Biotechnology Co., Ltd N/A
pCDH-CMV-RBM3-EF1-copGFP Beijing Tsingke Biotechnology Co., Ltd N/A
pLVX-RBM3-3Flag-Puro Beijing Tsingke Biotechnology Co., Ltd N/A
pCDH-CMV-RBM3mut-EF1-copGFP Beijing Tsingke Biotechnology Co., Ltd N/A
pLVX-RBM3mut-3Flag-Puro Beijing Tsingke Biotechnology Co., Ltd N/A
pLX304-CMV-RBM3-V5 Shanghai Jiao Tong University N/A
pCDH-CMV-SOX11-EF1-copGFP Beijing Tsingke Biotechnology Co., Ltd N/A
pLVX-SOX11-3Flag-Puro Beijing Tsingke Biotechnology Co., Ltd N/A

Software and algorithms

Prism 8 GraphPad https://www.graphpad.com/
ImageJ ImageJ https://imagej.net/software/imagej/
catRAPID omics v2.0 catRAPID http://service.tartaglialab.com/page/catrapid_omics2_group
Biorender Biorender https://biorender.com/

Other

Temperature-controlled blanket CWE Inc TC-1000
Stereotactic apparatus RWD N/A
Micro syringe pump Harvard Apparatus Pump 11 Elite