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. 1998 May;72(5):3837–3844. doi: 10.1128/jvi.72.5.3837-3844.1998

TABLE 1.

HHV-6 primers used in this study

HHV-6 ORF	Primer sequence (3′-5′)	Amplimer size (bp)^a
HHV-6 ORF	Primer sequence (3′-5′)	cDNA	DNA
U16-U17	AGAACTGCAAATCGTTCCG	315^b	401
	CGTAGAACAGAAGACCGGC
U18-U19-U20	TGATGAAGTGCCTATGGTGATT	526^b	2,064
	TAACATCGCAAGGTTGATCAG
U19	ACCGAACACTGTCGTATCGT	685	685
	ATCGTCAACTGGTCAAGTGC
U31	GATCCGACGCCTACAAACAC	831	831
	CGGTGTTACACAGCATGAACTCTC
U39	ACTGGACACAGTAGTCACCG	478	478
	AGACATTGAGGTATTGGATGC
U41	GTGAAAACTACGATTCAGGC	264	264
	TTTCGGAACATTGTTGAGC
U42	ACGATGGACATGGCTTGTTG	525	525
	ACCTTACAACGGAGACGCC
U53	CTGCGTTGCGCAGATACAG	652	652
	CGTTGTAGCTGTCGCAGACTC
U73	CAACTTCACTAACGGAGAGG	319	319
	AAGTTGAGAGGCATGCGG
U89-U90^c	ACAGCTACCGTCCCGATCC	682	789
	GACATCTCTTTGTTGTGTGCC
	ACAGCTACCATCCCGATCC	—^d	810^e
	GACATCTCTTTGTTGTGTGCC
U91	CAGAACAGTCAGGTATTTTCCCC	374	476
	GGCGCTGAAGCATGTAAGCA
U94	CATCGCATACGTCTCCCAG	450	450
	TCTCTAACGTGTCCGTGCC
U100	TGATCGGCCCCGACTCATC	703	1,045
	GTTGCTCCCGAAAGCGCC

^a

Based on the HHV-6A sequence (20).

^b

Putative cDNA (26).

^c

Variant-specific primers. The top sequences are HHV-6A; the bottom sequences are HHV-6B.

^d

—, the cDNA sequence is not available.

^e

Reference 11.