Table 1.
Proteins conserved in Mriyaviricetes
| conserved protein | Yaravirus brasiliensis protein ID | P. endemic virus 2 protein ID | notes | |||
|---|---|---|---|---|---|---|
| cluster | Annotation | this study | GenBank | this study | GenBank | |
| MCP | Major Capsid Protein | Yara@MT293574_40 | YP_010800661.1 | Ple2@KY346835_31 | AUD57312.1 | core Nucleocytoviricota (NCVOG0022) |
| ATPase | DNA packaging ATPase | Yara@MT293574_39 | YP_010800660.1 | Ple2@KY346835_25 | AUD57306.1 | core Nucleocytoviricota (NCVOG0249) |
| VLTF3 | virus late transcription factor 3 | Yara@MT293574_51 | YP_010800673.1 | Ple2@KY346835_24 | AUD57305.1 | core Nucleocytoviricota (NCVOG0262) |
| RuvC | RuvC-like Holliday junction resolvase | Yara@MT293574_67 | YP_010800690.1 | Ple2@KY346835_33 | AUD57314.1 | core Nucleocytoviricota (NCVOG0278) |
| PDDEXK | PDDEXK superfamily endonuclease | Yara@MT293574_2 | YP_010800622.1 | Ple2@KY346835_28 | AUD57309.1 | probable bacterial/phage origin; present in Nucleocytoviricota |
| SF3_hel1 | SF3 family helicase | Yara@MT293574_66 | YP_010800689.1 | |||
| SF3_hel2 | SF3 family helicase | Ple2@KY346835 2045..6606 | AUD57284.1 | |||
| VLTF2 | virus late transcription factor 2 | Ple2@KY346835_13 | AUD57294.1 | core Nucleocytoviricota (NCVOG1164) | ||
| Mriya_1 | Yara@MT293574_1 | YP_010800621.1 | Ple2@KY346835_29 | AUD57310.1 | Proteins of variable length; only one domain of about 100 amino acids conserved. | |
| Mriya_51 | Yara@MT293574_50 | YP_010800671.1 | Ple2@KY346835_22 | AUD57304.1 | High count in Yaravirus proteomics | |
| Mriya_50 | Yara@MT293574_49 | YP_010800670.1 | Ple2@KY346835_21 | AUD57302.1 | Two TM helices; uncharacterized homologs in mimiviruses and phycodnaviruses. | |
| Mriya_48 | envelope protein | Yara@MT293574_47 | YP_010800668.1 | Ple2@KY346835_19 | AUD57300.1 | Homologs in some members of Nucleocytoviricota (NCVOG1423) |
| HUH | HUH endonuclease | Yara@MT293574_27 | YP_010800648.1 | Ple2@KY346835_11 | AUD57292.1 | |
| HUH_long | HUH endonuclease domain protein | Ple2@KY346835_10 | AUD57291.1 | |||
| PEV_8 | Ple2@KY346835_8 | AUD57289.1 | ||||
| PEV_12 | Ple2@KY346835_12 | AUD57293.1 | ||||
| PEV_14 | Ple2@KY346835_14 | AUD57295.1 | ||||
| PEV_15 | Ple2@KY346835_15 | AUD57296.1 | ||||
| PEV_20 | Ple2@KY346835_20 | AUD57301.1 | ||||
| PEV_22 | minor capsid protein (mCP) | Yara@MT293574_45 | YP_010800666.1 | Ple2@KY346835_23 | AUD57303.1 | high count in Yaravirus proteomics |
| PEV_26 | ssDNA binding protein (ssb) | Ple2@KY346835_26 | AUD57307.1 | |||
| PEV_27 | Ple2@KY346835_27 | AUD57308.1 | ||||
| PEV_34 | Ple2@KY346835_34 | AUD57316.1 | ||||
| PEV_35 | Ple2@KY346835_35 | AUD57315.1 | ||||