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. 2023 Jul 20;8(3):233–247. doi: 10.1038/s41551-023-01067-5

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Extended Data Fig. 2 — a. Figure shows full width 2-dimensional oxonium ion maps for a plasma sample measured in the COVID-19 cohort, with 3 common oxonium ions (m/z 186.076, 204.087, 274.092) from single monosaccharide units and more specific ions corresponding to 2-4 saccharide units (N = HexNAc, H = Hex, S = Neu5Ac, F = Fucose). b. Example glycopeptide feature showing co-localisation of HexNAc-HexNAc oxonium ion (m/z 407.165) with common oxonium ions, although notably Neu5Ac-derived oxonium ions are absent.