TABLE 1.
Comparative proteomics reveals candidate antimicrobial proteinsa
| Protein names | Gene names | Length (aa) |
|---|---|---|
| Peptidoglycan hydrolase | 1,018 | |
| Uncharacterized protein YaaQ | 109 | |
| L-Lactate dehydrogenase | 323 | |
| Alanine dehydrogenase | 370 | |
| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | gatB | 476 |
| 6-Phospho-beta-glucosidase | 476 | |
| D-Alanine–D-alanine ligase | ddl | 369 |
| Probable DNA-directed RNA polymerase subunit delta | rpoE | 211 |
| Ribonuclease J | rnj | 556 |
| tRNA uridine(34) hydroxylase | trhO | 321 |
| Serine hydroxymethyltransferase | glyA | 412 |
| Uracil phosphoribosyltransferase | upp | 209 |
| Mn-containing catalase | 274 | |
| DEAD-box ATP-dependent RNA helicase | cshA | 518 |
| GMP reductase | guaC | 324 |
| NAD(P)H-dependent FMN reductase | 184 | |
| Uridine kinase | udk | 211 |
| 3-Oxoacyl-[acyl-carrier protein] reductase | 261 | |
| 23S rRNA (guanosine2251-2′-O)-methyltransferase | 283 | |
| Formate–tetrahydrofolate ligase | fhs | 556 |
| DNA-binding transcriptional regulator, MarR family | 153 | |
| Putative competence-damage inducible protein | cinA | 419 |
| Phosphate ABC transporter ATP-binding protein, PhoT family | 254 | |
| Uncharacterized protein | 346 |
a
Name, gene symbol, and length in amino acids of 24 proteins found to be enriched in active antimicrobial fractions after protein purification. Ribosomal subunits (e.g., 30S ribosomal subunit) were removed as low-confidence hits. Rows are unsorted.