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. 2024 Mar 26;10:33. doi: 10.1038/s41421-023-00642-z

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© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — a Correlation analysis of chromosome level CNV results between RNA-seq and ATAC-seq data. Only duplication effects (dup effect) and deletion effects (del effect) in overlapped the cytobands (chromosome region, see Materials and methods) were included for correlation analysis. Cytobands with inconsistent trend across different methods were labeled as “not correlated”. b Representative images of HE, IHC and IF staining results of tumor specific markers in tumor, tumor-adjacent tissue (Adj) and normal tissue sections. Scale bars, 100 μm.