alt-EJ	Alternative end joining
AML	Acute myeloid leukemia
ALL	Acute lymphoblastic leukemia
Cas9	CRISPR-associated Protein 9
CIN	Chromosome instability
CNevents	Copy number events
CNs	Copy numbers
CNV	Copy number variants
CRISPR	Clustered regularly interspaced short palindromic repeats
DSBs	Double-strand breaks
DNA	Deoxyribonucleic acid
FAB	French–American–British
FISH	Fluorescence in situ hybridization
FoSTeS	Fork stalling and template switching
guideRNA	Guide ribonucleic acid
IDT	Integrated DNA Technologies
IGV	Integrative Genomics Viewer
LINE	Long interspersed nuclear elements
MDS	Myelodysplastic syndrome
MMBIR	Microhomology-mediated break-induced relocation
MPseq	Mate pair sequencing
NGS	Next-generation sequencing
NHEJ	Non-homologous end joining
PCR	Polymerase chain reaction
RNA	Ribonucleic acid
SOB	Shortness of breath
SNP	Single-nucleotide polymorphism
SHH-MB	Sonic Hedgehog-induced medulloblastoma
SVs	Structural variants
UCSC	University of California Santa Cruz
VIA	Variant Intelligence Applications™
WGS	Whole-genome sequencing