| 9-1-1 | Rad 9–Hus 1–Rad 1 complex (fission yeast and human) equivalent to the |
| complex | Rad 17–Mec3–Ddc1 complex in budding yeast |
| aa | amino acid |
| AND-1/CTF4/ | acidic and nucleoplasmic DNA-binding protein/chromosome- |
| WDHD1 | Transmission Fidelity 4/WD repeat and HMG-box DNA-binding protein 1 |
| A-T | Ataxia telangiectasia |
| ATM | Ataxia telangiectasia-mutated |
| ATR | ATM-Rad 3-related protein kinase |
| ATRIP | ATR interacting protein |
| ba | bases |
| BLM | Bloom’s helicase |
| CDC | cell division cycle |
| CDK | cyclin-dependent kinase |
| CDT1 | chromatin licensing and DNA replication factor 1 (also known as CDC10-dependent transcript 1 in S. pombe) |
| CMG | CDC45–MCM2-7–GINS |
| CST | CTC1–STN1–TEN1 |
| DBD | DNA-binding domain |
| DDR | DNA damage response |
| DH | double hexamer |
| DSB | double-strand break |
| dsDNA | double-stranded DNA |
| ETAA1 | Ewing’s Tumour-Associated Antigen 1 |
| G4 | G-quadruplexes |
| IC | initiation complex |
| hPolprim1 | human primase-polymerase 1 |
| MCM | minichromosome maintenance |
| MTBP | Mouse double minute 2-binding protein |
| nt | nucleotide |
| PCNA | proliferating cell nuclear antigen |
| PIKK | phosphotnositol-3 kinase-like protein kinase |
| Pol α | DNA polymerase α–primase |
| Pol δ | DNA polymerase δ |
| Pol ε | DNA polymerase ε |
| POT1 | protector of telomeres 1 |
| Pre-RC | pre-replicative complex |
| Pre-IC | pre-initiation complex |
| RAD | radiation-induced mutation |
| RFC | replication factor C |
| RPA | replication protein A |
| SSB | single-stranded DNA-binding protein |
| ssDNA | single-stranded DNA |
| S. cerevisiae | Saccharomyces cerevisiae |
| S. pombe | Schizosaccharomyces pombe |
| SV40 | simian virus 40 |
| Tp53 | tumour suppressor protein p53 |
| TOPBP1 | topoisomerase II-binding protein 1 |