| log.HR = log(rep(c(1,2),c(9900,100))) # log hazard ratio for each gene |
| v = rep(1,10000) # variance of each gene |
| res = n.fdr.coxph(fdr = 0.1, pwr = 0.8, |
| logHR = log.HR, v = v, pi0.hat = “BH”) |
| res |
| ## $n |
| ## [1] 37 |
| ## |
| ## $computed.avepow |
| ## [1] 0.8139159 |
| ## |
| ## $desired.avepow |
| ## [1] 0.8 |
| ## |
| ## $desired.fdr |
| ## [1] 0.1 |
| ## |
| ## $input.pi0 |
| ## [1] 0.99 |
| ## |
| ## $alpha |
| ## [1] 0.0008879023 |
| ## |
| ## $n0 |
| ## [1] 36 |
| ## |
| ## $n1 |
| ## [1] 37 |
| ## |
| ## $n.its |
| ## [1] 7 |
| ## |
| ## $max.its |
| ## [1] 50 |