log.HR = log(rep(c(1,2),c(9900,100))) # log hazard ratio for each gene |
v = rep(1,10000) # variance of each gene |
res = n.fdr.coxph(fdr = 0.1, pwr = 0.8, |
logHR = log.HR, v = v, pi0.hat = “BH”) |
res |
## $n |
## [1] 37 |
## |
## $computed.avepow |
## [1] 0.8139159 |
## |
## $desired.avepow |
## [1] 0.8 |
## |
## $desired.fdr |
## [1] 0.1 |
## |
## $input.pi0 |
## [1] 0.99 |
## |
## $alpha |
## [1] 0.0008879023 |
## |
## $n0 |
## [1] 36 |
## |
## $n1 |
## [1] 37 |
## |
## $n.its |
## [1] 7 |
## |
## $max.its |
## [1] 50 |