Table 2.
Genomic prediction ability represented by the average (mean) correlation between observed and predicted values from models G, GI, ABD, and ABDI for five-fold random cross-validation for cross-validations CV1, CV2, and CV3 (standard errors, SEs, are in parenthesis). The best means of models for each disease trait and cross-validation are given in bold for each trait.
Traits | CV1 | CV2 | CV3 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G | GI | ABD | ABDI | G | GI | ABD | ABDI | G | GI | ABD | ABDI | ||
TS | Mean | 0.702 | 0.724 | 0.702 | 0.724 | 0.632 | 0.639 | 0.632 | 0.635 | 0.691 | 0.714 | 0.691 | 0.715 |
SE | 0.007 | 0.007 | 0.007 | 0.007 | 0.010 | 0.011 | 0.010 | 0.011 | 0.009 | 0.009 | 0.009 | 0.009 | |
SNB | Mean | 0.597 | 0.647 | 0.596 | 0.650 | 0.481 | 0.487 | 0.479 | 0.484 | 0.587 | 0.641 | 0.587 | 0.644 |
SE | 0.010 | 0.009 | 0.009 | 0.009 | 0.017 | 0.017 | 0.017 | 0.017 | 0.008 | 0.008 | 0.009 | 0.008 | |
SB | Mean | 0.482 | 0.500 | 0.486 | 0.506 | 0.370 | 0.394 | 0.371 | 0.401 | 0.475 | 0.495 | 0.476 | 0.500 |
SE | 0.011 | 0.011 | 0.011 | 0.010 | 0.017 | 0.015 | 0.017 | 0.014 | 0.014 | 0.014 | 0.014 | 0.014 |