ACE2	Angiotensin-converting enzyme 2.
ARDS	Acute respiratory distress syndrome.
AT1	Alveolar type I.
AT2	Alveolar type II.
BALF	Broncho-alveolar lavage fluid.
BioC	Bioconductor.
CD4	Cluster of differentiation 4.
CD8	Cluster of differentiation 8.
COVID-19	Coronavirus disease 2019.
CSF	Cerebrospinal fluid.
DEG	Differentially expressed gene.
EC	Endothelial cell.
GEO	Gene Expression Omnibus.
GSEA	Gene set enrichment.
GZMA	Granzyme A.
GZMB	Granzyme B.
HPIV3	Human parainfluenza virus 3.
HUVEC	Human umbilical vein EC.
IAV	H1N1 influenza A virus.
ID	Identifier.
IPF	Idiopathic pulmonary fibrosis.
ISG15	Interferon-stimulated gene 15.
LUCAT1	Lung cancer-associated transcript 1.
MIS-C	Multisystem inflammatory syndrome.
NGS	Next-generation sequencing.
NK	Natural killer.
ORFs	Open reading frames.
PBMCs	Peripheral blood mononuclear cells.
PMID	PubMed unique identifier.
RNA-seq	RNA sequencing.
SARS	Severe acute respiratory syndrome.
SARS-CoV-2	SARS coronavirus 2.
STRING	Protein–protein interaction networks functional enrichment analysis.
Scopus	Elsevier abstract and citation database.
TCR	T-cell receptor.
TCGA	The Cancer Genome Atlas.
UMAP	Uniform manifold approximation and projection.
hACE2	Human angiotensin-converting enzyme 2.
pDCs	Plasmacytoid dendritic cells.
scRNA-seq	Single-cell RNA sequencing.