| Bacterial and virus strains |
|
| Cultivated strains |
Stanojković et al.6
|
Table S1 |
| Herbarium specimens |
National History Museum – London, UK |
Table S6 |
|
| Chemicals, peptides, and recombinant proteins |
|
| Z – medium |
Staub64
|
N/A |
|
| Deposited data |
|
| Accesion numbers of cultivated strains and herbarium specimens |
Stanojković et al.6
|
Tables S1 and S6, NCBI BioProject: PRJNA985139 |
| All cell dimension measurements |
This study |
https://doi.org/10.17632/vbnmztmgpy.2 |
| Correlation values for all strains against all climatic variables |
This study |
https://doi.org/10.17632/vbnmztmgpy.2 |
| R script: pointiness and variables |
This study |
https://doi.org/10.17632/vbnmztmgpy.2 |
|
| Software and algorithms |
|
| Orthofinder v2.3.1 |
Emms, Kelly65
|
https://github.com/davidemms/OrthoFinder/releases |
| IQ-TREE v1.6.1 |
Nguyen et al.66
|
http://www.iqtree.org/ |
| fastBAPS |
Tonkin-Hill et al.67
|
https://github.com/gtonkinhill/fastbaps |
| R v4.1.3 |
R Core Team68
|
https://www.R-project.org |
| AliView |
Larsson69
|
https://doi.org/10.1093/bioinformatics/btu531 |
| CIMS |
Labrada et al.70
|
https://doi.org/10.5507/fot.2023.008 |
| SPOT-RNA |
Singh et al.71
|
https://doi.org/10.1038/s41467-019-13395-9 |
| PAST |
Hammer et al.72
|
http://palaeo-electronica.org/2001_1/past/issue1_01.htm. |
| QGis v3.22.8 |
QGIS.org73
|
www.qgis.org |