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. 2024 Mar 8;32(5):102023. doi: 10.1016/j.jsps.2024.102023

Table 4.

Free energy (MM-GBSA) analysis of SARS-CoV-2 Mpro interaction with compounds 4,5,10 and 14.

Compound ΔG
or
ΔGBind
ΔGCoulomb ΔGCovalent ΔGH-bond ΔGSA
or
ΔGSol_Lipo
ΔGSolv
or
ΔGSolGB
ΔGPacking ΔGvdW
4 −35.07 −33.32 2.08 −4.18 −4.54 24.86 −1.27 −18.70
5 −34.59 −23.70 2.28 −3.97 −7.85 30.94 −2.78 −29.51
10 −31.44 −21.82 1.68 −2.14 −4.07 12.02 −1.47 −15.64
14 −15.38 −15.53 6.80 −3.29 −4.59 22.23 −1.45 −19.55

ΔGCovalent, ΔGvdW, ΔGSolv or ΔGSolGB, ΔGCoulomb, ΔGH-bond, ΔGPacking, ΔGSA or ΔGSol-Lipo, and ΔG or ΔGBind stands for minimized molecular mechanics energies namely covalent binding energy, van der Waals’ energy, solvation energy, coulomb energy, energy due to H-bonds, packing energy, lipophilic energy, and binding energy, respectively. All the energies are in kcal/mol.