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. 2024 Mar 15;58(12):5279–5289. doi: 10.1021/acs.est.3c10409

Table 1. Substitutions of Amino Acid Residues Between Genogroups A and B of CVB5, and Description of Mutants Produced in this study.

      genogroup A
genogroup B        
protein residuea locationb (n = 7) Faulkner (n = 6) at the capsid surface Met invloved mutants generated in this study name of mutantc
VP1 19 interior G G S        
VP1 95 interior S N N        
VP1 156 EF loop V V I x   x CVB5F.cas.VP1.V156I
VP1 180 buried, hydrophobic pocket M M I   x x CVB5F.cas.VP1.M180I
VP1 276 C-terminal D D E x   x CVB5F.cas.VP1.D276E
VP1 279 C-terminal T T A x   x CVB5F.cas.VP1.T279A
VP2 37 interior V V T        
VP2 45 interior D D E        
VP2 137 EF loop (puff) L L I x   x CVB5F.cas.VP2.L137I
VP2 156 EF loop (puff) E E D x   x CVB5F.cas.VP2.E156D
VP2 160 EF loop (puff) S S T x   x CVB5F.cas.VP2.S160T
VP2 260 C-terminal K K R x   x CVB5F.cas.VP2.K260R
VP3 35 interior E/N/Dd E A        
VP3 63e N-terminal helix close to β-strand B (knob) M/Ld M S/Td x x x CVB5F.cas.VP3.M63L
VP3 67f N-terminal helix close to β-strand B (knob) S/A A A        
VP3 88 CD loop T/M/Id T I x   x CVB5F.cas.VP3.T88I
VP4 17 disordered L L V        
VP4 45 interior D D E        
VP4 47 interior T T A        
VP1–4 all of the above excepte,f             CVB5F.cas.genogroupB
a

The numbering of amino acids is according to the residue positions in the CVB5 Faulkner.63

b

The location was assigned according to previous studies.40,64

c

CVB5F.cas corresponds to the Faulkner strain with a ClaI restriction site introduced at a non-structural protein region (nucleotide position 3340).

d

Multiple amino acid residues were observed within the genogroup.

e

Strains belonging to genogroup B do not possess single specific amino acids.

f

The same amino acid residue is observed for CVB5 Faulkner and strains belonging to genogroup B.