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. 2024 Mar 18;20(3):e1011942. doi: 10.1371/journal.pcbi.1011942

Table 2. Strategies examined in the benchmark and associated parameters applied to load_confounds.

strategy image high_pass motion wm_csf global_signal scrub fd_thresh std_dvars_threshold compcor n_compcor ica_aroma
baseline desc-preproc_bold True N/A N/A N/A N/A N/A N/A N/A N/A N/A
simple desc-preproc_bold True full basic N/A N/A N/A N/A N/A N/A N/A
simple+gsr desc-preproc_bold True full basic basic N/A N/A N/A N/A N/A N/A
scrubbing.5 desc-preproc_bold True full full N/A 5 0.5 None N/A N/A N/A
scrubbing.5+gsr desc-preproc_bold True full full basic 5 0.5 None N/A N/A N/A
scrubbing.2 desc-preproc_bold True full full N/A 5 0.2 None N/A N/A N/A
scrubbing.2+gsr desc-preproc_bold True full full basic 5 0.2 None N/A N/A N/A
compcor desc-preproc_bold True full N/A N/A N/A N/A N/A anat_combined all N/A
compcor6 desc-preproc_bold True full N/A N/A N/A N/A N/A anat_combined 6 N/A
aroma desc-smoothAROMAnonaggr_bold True N/A basic N/A N/A N/A N/A N/A N/A full

* 50% variance explained.

** In Ciric et al. (2017), there was a variation of the ICA-AROMA strategy including global signal regressor. The global signal regressor generated by fMRIPrep does not follow the recommendation of Pruim et al. [32]. The result of ICA-AROMA+GSR can be found in the first version of the preprint.

*** Referring to the non-aggressive implementation in Pruim and colleagues’ work [32]