Table 3.

Analysis of variance for all the accessions comparing manual versus pipeline measurements after implementing QC

Samples	Effect	DFn	DFd	F	P
1_7	Benchmark	2	15	0.749	0.49
13_3	Benchmark	2	15	0.714	0.506
15_27	Benchmark	2	15	0.132	0.877
16_34	Benchmark	2	15	0.758	0.486
17_23	Benchmark	2	15	0.297	0.747
19_3	Benchmark	2	12	5.65	0.019
2_12	Benchmark	2	15	0.881	0.435
20_29	Benchmark	2	15	0.03	0.97
21_12	Benchmark	2	15	0.169	0.846
22_22	Benchmark	2	15	0.017	0.983
25_8	Benchmark	2	12	1.61	0.241
26_15	Benchmark	2	15	0.002	0.998
27_10	Benchmark	2	12	0.747	0.495
28_11	Benchmark	2	15	0.069	0.934
3_23	Benchmark	2	15	0.216	0.808
4_18	Benchmark	2	15	0.07	0.933
7_18	Benchmark	2	15	0.099	0.906