Fig. 7.

Evidence of clonal structure for population m3. a) Our method suggests patterns of clade competition around generation 42,000 (between clade 1 and clade 2) and during the last 5,000 generations (between clade 4 and clade 5), b) in contrast with previous results (Good et al. 2017). c), The D matrix segmented into groups during the clustering process. We can see prominent competition signals (negative entries) between clade 1 and clade 2, and between clade 4 and clade 5 in the D matrix. The population m3 is one of the mutator populations which have notably higher mutation rates and more mutations than other populations.