Skip to main content
. 2024 Mar 13;4(1):vbae041. doi: 10.1093/bioadv/vbae041

Table 3.

Comparison results of predictors for bitter/non-bitter and bitter/sweet prediction.

Classification Type Model Algorithm Input TN FP FN TP TPR TNR PRE ACC AP F1 MCC AUC
Bitter/Non-bitter BoCNN CNN Molecular Figure 132 31 33 82 0.71 0.81 0.73 0.77 0.64 0.72 0.52 0.76
BoMLP MLP Descriptors 119 44 33 82 0.71 0.73 0.65 0.72 0.58 0.68 0.44 0.72
BoMLP MLP RDKFP 141 22 16 99 0.86 0.86 0.82 0.86 0.76 0.84 0.72 0.86
BitterPredict Adapt Boost Descriptors 133 30 32 83 0.72 0.82 0.73 0.78 0.65 0.73 0.54 0.77
VisualTaste Random Forest Descriptors 95 68 20 95 0.83 0.58 0.58 0.68 0.55 0.68 0.41 0.7
BitterX SVM Descriptors 38 125 18 97 0.84 0.23 0.44 0.49 0.43 0.58 0.09 0.54
HGNN GNN Atom and Bond Feature 121 42 12 103 0.9 0.74 0.71 0.81 0.68 0.79 0.63 0.82
WLN GNN Atom and Bond Feature 140 23 14 101 0.88 0.86 0.81 0.87 0.77 0.84 0.73 0.87
AttentiveFP GNN Atom and Bond Feature 150 13 24 91 0.79 0.92 0.88 0.87 0.78 0.83 0.72 0.86
GraphSAGE GNN Atom Feature 146 17 18 97 0.84 0.9 0.85 0.87 0.78 0.85 0.74 0.87
Bitter/Sweet BoCNN CNN Molecular Figure 114 25 29 86 0.75 0.82 0.78 0.79 0.69 0.76 0.57 0.78
BoMLP MLP Descriptors 108 31 37 78 0.68 0.78 0.72 0.73 0.63 0.7 0.46 0.73
BoMLP MLP RDKFP 126 13 23 92 0.8 0.91 0.88 0.86 0.79 0.84 0.71 0.85
HGNN GNN Atom and Bond Feature 122 17 18 97 0.84 0.88 0.85 0.86 0.79 0.85 0.72 0.86
WLN GNN Atom and Bond Feature 122 17 21 94 0.82 0.88 0.85 0.85 0.77 0.83 0.7 0.85
AttentiveFP GNN Atom and Bond Feature 130 9 22 93 0.81 0.94 0.91 0.88 0.82 0.86 0.76 0.87
GraphSAGE GNN Atom Feature 127 12 22 93 0.81 0.91 0.89 0.87 0.8 0.85 0.73 0.86