Table 2.

Overview of SNPs tagging CNVs for proteins reported by Sun et al. (2018). CNV frequencies are derived from the EstBB data.

chr	Position	marker	CNV	CNV Frequency	R2	Type	gene	protein
1	55,097,068	rs11206397	1:55,092,289- 55,095,991	deletion 0.538	0.90	cis	FAM151A	F151A
1	159,004,851	rs72709516	1:159,016,577- 159,019,397	duplication 0.001, deletion 0.122	0.97	cis	IFI16	IP16
1	196,821,380	rs115094736	1:196,728,841- 196,730,702	deletion 0.265	0.97	trans	CANX	Calnexin
1	196,825,287	rs7519758	1:196,728,841- 196,730,702	deletion 0.265	0.96	trans	LRRC19	LRC19
3	98,416,900	rs10935473	3:98,410,653- 98,414,807	deletion 0.651	1.00	trans	FLT4	VEGF sR3
6	32,587,859	rs9271421	6:32,461,274- 32,468,482	deletion 0.973	0.86	trans	H6PD	G6PE
8	57,876,576	rs112433249	8:57,918,258- 57,925,230	deletion 0.031	0.90	cis	IMPAD1	IMPA3
16	89,781,756	rs34714188	16:89,896,104- 89,898,445	duplication 0.001, deletion 0.108	0.91	trans	PMEL	GP100