Table 2.
Primer pairs used for RT-PCR and qPCR
| Gene name | Accession number | Orientation | Nucleotide sequence | Nucleotide position | Product Length (bp) | Annealing Temp (℃) |
|---|---|---|---|---|---|---|
| Map1a | NM_030995.2 |
Sense Anti-Sense |
5’-AAACGGAGGCTGATCAAGGA-3’ 5’-TTCAGGTCTGGCTTGGAGAG-3’ |
1174–1193 1375–1394 |
221 | 60.0 |
| Map1b | NM_019217.1 |
Sense Anti-Sense |
5’-GGAAGAAGACGGGGAAGACA-3’ 5’-GTCCTCTGCTTTGTCCTCCT-3’ |
2841–2860 3047–3066 |
226 | 60.0 |
| Map1s | NM_001106070.1 |
Sense Anti-Sense |
5’-CCCTGGAGAAGCAGAGAACA-3’ 5’-GACTCGTCCACCTCAGTTGA-3’ |
1653–1672 1873–1892 |
240 | 60.0 |
| Map2 | NM_013066.1 |
Sense Anti-Sense |
5’-TCTCAGTTCAGTGCCAGAGG-3’ 5’-TTTCCTGAGGTGCTTCGGAT-3’ |
3051–3070 3252–3271 |
221 | 60.0 |
| Map4 | NM_039082634.1 |
Sense Anti-Sense |
5’-GGGTGTGTTTTTGAGCAGGT-3’ 5’-GCAGGCTCCAAGCATAGTTC-3’ |
8387–8406 8566–8585 |
199 | 60.0 |
| Map6 | NM_017204.1 |
Sense Anti-Sense |
5’-CAGCTACAGTGCCCAGTTCA-3’ 5’-TCTGGCTCGTTGAGGTCTTT-3’ |
2026–2045 2179–2198 |
173 | 60.0 |
| Map7 | NM_001106270.2 |
Sense Anti-Sense |
5’-GAATGGAATTTCAGGCTCCA-3’ 5’-ATGCCACCTCAGGGTATCAG-3’ |
2468–2487 2629–2648 |
181 | 60.0 |
| Map9 | NM_001135716.1 |
Sense Anti-Sense |
5’-TGATCAAGACGTTGGCAGAG-3’ 5’-GGGCAGAATCTTCGGTTGTA-3’ |
608–627 812–831 |
224 | 60.0 |
| Map10 | NM_001277391.1 |
Sense Anti-Sense |
5’-ATTTTGCCCTCCTCCTCTGT-3’ 5’-CCCTGCATCTGTGGAAGATT-3’ |
805–824 1007–1026 |
222 | 60.0 |
| Map6d1 | NM_001108844.1 |
Sense Anti-Sense |
5’-GAAGCCCTCAAGATCCACAA-3’ 5’-GAGGGGCTGATGTCTGAAAG-3’ |
416–435 548–567 |
152 | 60.0 |
| Map7d3 | NM_001271327.1 |
Sense Anti-Sense |
5’-TCCTGTTGTCAGCTTGGATG-3’ 5’-GGTGCTTGTTTCTTGGTGGT-3’ |
1107–1126 1336–1355 |
249 | 60.0 |
| Kif15 | NM_181635.2 |
Sense Anti-Sense |
5’-CAGCTTCAGCTGGACAATGC-3’ 5’-TGTTGCGCTCTTTTTCTGCC-3’ |
2547–2566 2741–2760 |
214 | 60.0 |
| S16 | NM_001169146.1 |
Sense Anti-Sense |
5’-TCCGCTGCAGTCCGTTCAAGTCTT-3’ 5’-GCCAAACTTCTTGGATTCGCAGCG-3’ |
87–110 448–471 |
385 | 60.0 |