Table 1.
Summary of characteristics of essential genes.
| Category | Feature | Description | References |
|---|---|---|---|
| Sequence features | Expression level | Studies have shown that essential genes are expressed at higher levels than nonessential genes. | [96, 97] |
| Codon bias | Essential genes are more likely to use optimal codons. Some characteristics of codons can serve as parameters for assessing the ideal codon usage, which plays a critical role in ensuring precise translation of highly expressed genes. | [98, 99] | |
| Protein size | Larger proteins have more biological functions and are more conserved, it is believed that larger proteins tend to be enriched in essential proteins. | [100] | |
| Gene position | There is a higher proportion of essential genes located in operons and the leading strand. | [101] | |
| Subcellular location | Essential proteins are found predominantly in the cytoplasm, although significantly greater proportions of nonessential proteins are situated in other cellular areas. | [100, 102] | |
| Hurst exponent | Essential genes have a lower average Hurst exponent. | [103] | |
| Context‐related features | Evolutionary relationships | Essential genes evolve more slowly than nonessential genes. | [104, 105] |
| Protein function | Essential genes are hubs of protein–protein interaction networks, which are more commonly involved in fundamental categories according to gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway. | [106, 107] | |
| Protein‐protein interactions | Essential genes tend to have higher connectivity in protein‐protein interaction networks. | [108, 109] | |
| Domain properties | Protein essentiality is to be conserved through the function of protein domains or domain combinations. | [110, 111] |