TABLE 1.
Primers used in site-directed mutagenesis
| No. | Sequence | Resulting mutanta |
|---|---|---|
| 1 | 5′-GTCTAAACATACACGGTACCTTTC-3′ | |
| 2 | 5′-CCAAACATTATGAATAGTAC-3′ | S2N |
| 3 | 5′-AAGGTACCAAACATTATGGCTGCTAC | A2A3 |
| 4 | 5′-AAGGTACCAAACATTATGAGTAGTGCTGC-3′ | A4A5 |
| 5 | 5′-CAAACATTATGAGTAGTACAACACAAGCCGCAGAGG-3′ | A8A10 |
| 6 | 5′-CCAAACATTATGGCTAGTAG | Ains2 |
| 7 | 5′-CCAAACATTATGCATCACCATCACCATCACAGTAGCACTACTCAGGCCC-3′ | His |
| 9 | 5′-CACAGAATTCTGATTGGATCC-3′ | |
| 10 | 5′-GTGTATAGATATGAAAGGTACCGTG-3′ | |
| 11 | 5′-GCTCTAGACTACAATGCTGTGTCCGCGCC-3′ | Δ3 |
| 12 | 5′-GCTCTAGATCACAACAATGCGGTGTCCG-3′ | Δ2 |
| 13 | 5′-GCTCTAGACTATCTCAACAATGCGGTGTC-3′ | Δ1 |
| 14 | 5′-CGTCTAGATTAGATTCTCAACAATGCGG-3′ | T228I |
| 15 | 5′-CGTCTAGATTAGATTCTCAACAATGCGG-3′ | T228L |
| 16 | 5′-GCTCTAGATTAGACTCTCAACAATGCGG-3′ | T228V |
| 17 | 5′-GCTCTAGATTAGTTTCTCAACAATGCGG-3′ | T228N |
| 18 | 5′-GCTCTAGATTAGATATTATTTCTCAACAATGCGG-3′ | OC |
| 19 | 5′-CGTCTAGATCCGGTTCTCAACAATG-3′ | +5 |
| 20 | 5′-GCTCTAGATTAGGTTGCCAACAATGCGGTG-3′ | R227A |
| 21 | 5′-TTAGGTGTCCGCGCCACTCGGT-3′ | Δ5 |
| 22 | 5′-CTATTTGTTTGAGGGCAGTCGG-3′ | Δ11 |
| 23 | 5′-TTAATTTCCGACCTTGGACTTC-3′ | Δ18 |
| 24 | 5′-GTCCAAGGTAGGAAACGGCCGACTGC-3′ | Y211G |
| PM149 | 5′-GATTACCATACACTAACA-3′ | |
| LK-10 | 5′-CAACAATGCGGTGTCCGCGCCAC-3′ | |
| LK-24 | 5′-CGCATTGTTGAGA(GATC)T(GC)TAATCTAAAC-3′ | T228M, T228I, T228L, T228F, T228V |
| LK-26 | 5′-GATATGAAGGGTACCATGTATGTTAGGCCG-3′ | |
| LK-27 | 5′-CATCCTTAAAGTTTAGATTAGATATTATTTCTC-3′ | BCV |
| LK-28 | 5′-TAATCTAAACTTTAAGGATGTCTTTTGTTC-3′ | BCV |
| LK-29 | 5′-GCGATTATTTGGCCCACGGG-3′ | |
| LK-30 | 5′-CACCGCATTGTTGAGA(AT)A(GT)TAATCTAAACTTTAAGG-3′ | T228Y |
| LK-31 | 5′-CACCGCATTGTTGAGAAATTAATCTAAACTTTAAGG-3′ | T228N |
| LK-32 | 5′-CACCGCATTGTTGAGATAGTAATCTAAACTTTAAGG-3′ | Δ1 |
| LK-38 | 5′-ACCGCATTGTTGTAGACCTAATCTAAAC-3′ | Δ2 |
| LK-39 | 5′-AGATTAGGTCTACAACAATGCGGTGTCCGCGCC-3′ | Δ2 |
| LK-40 | 5′-GACACCTAGTAGTTGAGAACCTAATCTAAAC-3′ | Δ5 |
| LK-41 | 5′-GGTTCTCAACTACTAGGTGTCCGCGCCACTCGG-3′ | Δ5 |
| LK-42 | 5′-GGAAATTAATAGCGACTGCCCTCAAACAAACCG-3′ | Δ18 |
| LK-43 | 5′-GGGCAGTCGCTATTAATTTCCGACCTTGGACTTC-3′ | Δ18 |
Primers 1 to 24 were used for construction of expression vectors for VLP mutants. Primers PM149 to LK-43 were used for construction of transcription vectors for the generation of viral mutants.