. 2024 Jan 12;14(4):jkae006. doi: 10.1093/g3journal/jkae006

Table 3.

Overview of BGCs in C. mycophilum ATHUM6906, detailing their type and genomic location.

Number	BGC	Type	Location [from–to]	Family	Most similar known cluster (MIBiG accession)
1	contig1.region001	T1PKS	Contig 1 [20,937–68,853]	FAM_01521
2	contig1.region002	Fungal RiPP	Contig 1 [204,455–246,483]	FAM_01522
3	contig1.region003	T1PKS	Contig 1 [1,036,058–1,079,067]	FAM_01523^a
4	contig1.region004	NRPS-like, terpene	Contig 1 [1,427,122–1,468,197]	FAM_01524^a	EQ-4 (BGC0001668)
5	contig1.region005	NRPS	Contig 1 [1,470,220–1,514,188]	FAM_01525
6	contig1.region006	NRPS-like	Contig 1 [1,721,962–1,761,887]	FAM_01526^a
7	contig1.region007	T1PKS	Contig 1 [4,897,237–4,943,226]	FAM_01527	Depudecin (BGC0000046)
8	contig1.region008	T1PKS	Contig 1 [4,994,689–5,030,604]	FAM_01528
9	contig1.region009	Terpene	Contig 1 [5,138,026–5,155,781]	FAM_01529
10	contig1.region010	T1PKS, terpene	Contig 1 [5,158,976–5,238,693]	FAM_01530^a
11	contig1.region011	Terpene, NRPS	Contig 1 [5,266,986–5,324,387]	FAM_01531^a
12	contig1.region012	Terpene	Contig 1 [5,362,297–5,384,604]	FAM_01532^a
13	contig1.region013	NRPS, T1PKS	Contig 1 [5,470,781–5,522,004]	FAM_01533^a
14	contig10.region001	NRPS, T1PKS	Contig 10 [219,692–291,584]	FAM_01534^a	TAN-1612 (BGC0000156)
15	contig10.region002	T1PKS	Contig 10 [368,207–413,059]	FAM_01535^a	Neurosporin A (BGC0001668)
16	contig10.region003	NRPS	Contig 10 [460,675–503,357]	FAM_01536^a
17	contig10.region004	NRPS	Contig 10 [558,013–605,851]	FAM_01537^a	Ustiloxin B (BGC0000627)
18	contig10.region005	Terpene	Contig 10 [1,278,927–1,300,991]	FAM_01514
19	contig10.region006	NRPS	Contig 10 [1,334,843–1,379,470]	FAM_01539^a
20	contig10.region007	T1PKS	Contig 10 [1,606,196–1,651,183]	FAM_01540^a
21	contig10.region008	T1PKS	Contig 10 [2,199,826–2,243,385]	FAM_01541^a
22	contig10.region009	T1PKS	Contig 10 [3,716,849–3,748,753]	FAM_01542^a
23	contig10.region010	T1PKS, NRPS	Contig 10 [3,936,152–3,988,125]	FAM_01543^a
24	contig13.region001	NRPS-like	Contig 13 [24,41–69,081]	FAM_01544
25	contig13.region002	NRPS, T1PKS	Contig 13 [95,903–196,559]	FAM_01545^a	Chaetoglobosins (BGC0001182)
26	contig16.region001	Terpene	Contig 16 [272,867–293,287]	FAM_01546
27	contig16.region002	T1PKS	Contig 16 [380,593–425,348]	FAM_01547^a
28	contig16.region003	T3PKS	Contig 16 [1,649,997–1,690,854]	FAM_01548^a
29	contig16.region004	NRPS	Contig 16 [1,980,369–2,022,000]	FAM_01191
30	contig16.region005	T1PKS	Contig 16 [2,179,010–2,222,991]	FAM_01550	Cichorine (BGC0000037)
31	contig16.region006	Terpene	Contig 16 [3,599,879–3,610,426]	FAM_01205
32	contig16.region007	NRPS	Contig 16 [3,972,935–4,023,015]	FAM_01206
33	contig16.region008	T1PKS, NRPS	Contig 16 [4,292,252–4,339,457]	FAM_01553	Cytochalasin E/K (BGC0000983)
34	contig16.region009	T1PKS	Contig 16 [4,350,647–4,396,720]	FAM_01554^a
35	contig16.region010	T1PKS	Contig 16 [4,610,190–4,659,198]	FAM_01491
36	contig16.region011	T1PKS, NRPS-like, NRPS, fungal RiPP	Contig 16 [4,744,292–4,896,083]	FAM_01556^a	Imizoquin-A/-B/-C/-D\|TMC-2A/-2B (BGC0001621)
37	contig16.region012	T1PKS, terpene	Contig 16 [4,913,043–4,982,503]	FAM_01493
38	contig3.region001	NRPS	Contig 3 [302,615–351,334]	FAM_01558^a
39	contig3.region002	NRPS-like	Contig 3 [795,142–838,465]	FAM_01559^a
40	contig3.region003	Siderophore	Contig 3 [990,497–1,004,040]	FAM_01560^a
41	contig7.region001	Terpene	Contig 7 [59,882–70,098]	FAM_01561^a
42	contig7.region002	Fungal RiPP, terpene, T1PKS	Contig 7 [144,815–214,625]	FAM_01562^a	Ustiloxin B (BGC0000627)
43	contig7.region003	NRPS	Contig 7 [461,278–502,739]	FAM_01563^a
44	contig7.region004	T1PKS	Contig 7 [586,782–624,931]	FAM_01564	Fumagillin\|β-trans-bergamotene\|fumagillol (BGC0001067)
45	contig7.region005	Terpene	Contig 7 [743,071–762,455]	FAM_01565^a
46	contig7.region006	T1PKS	Contig 7 [854,062–899,633]	FAM_01566^a
47	contig7.region007	Terpene	Contig 7 [1,795,286–1,816,474]	FAM_00237
48	contig7.region008	Terpene	Contig 7 [2,166,178–2,178,846]	FAM_01137	Squalestatin S1 (BGC0001839)
49	contig7.region009	T1PKS	Contig 7 [2,484,124–2,529,280]	FAM_01448	Wortmanamide -A/-B (BGC0001954)
50	contig7.region010	T1PKS	Contig 7 [5,466,710–5,537,203]	FAM_01570
51	contig7.region011	Terpene	Contig 7 [5,843,774–5,859,003]	FAM_01571^a
52	contig7.region012	Terpene, T1PKS	Contig 7 [6,069,426–6,119,692]	FAM_01572	Clavaric acid (BGC0001248)
53	contig7.region013	NRPS	Contig 7 [6,222,719–6,285,023]	FAM_01573
54	contig7.region014	NRPS	Contig 7 [6,418,277–6,472,527]	FAM_01199
55	contig7.region015	T1PKS	Contig 7 [6,960,878–7,008,551]	FAM_01575^a
56	contig7.region016	T1PKS	Contig 7 [7,041,422–7,089,522]	FAM_01576	Solanapyrone D (BGC0000146)
57	contig7.region017	NRPS	Contig 7 [7,536,613–7,583,924]	FAM_01577^a	Chrysogine (BGC0001545)
58	contig8.region001	T1PKS, NRPS-like	Congit 8 [38,977–117,909]	FAM_01578^a
59	contig9.region001	T1PKS	Contig 9 [130,274–168,905]	FAM_01579^a
60	contig9.region002	Siderophore	Contig 9 [220,046–231,546]	FAM_01580^a
61	contig9.region003	T1PKS	Contig 9 [709,705–748,491]	FAM_01581	Alternariol (BGC0000013)
62	contig9.region004	Terpene	Contig 9 [753,035–766,04]	FAM_01260
63	contig9.region005	NRPS, NRPS-like	Contig 9 [781,396–847,887]	FAM_01583
64	contig9.region006	T1PKS	Contig 9 [2,328,638–2,372,546]	FAM_01584
65	contig9.region007	Terpene	Contig 9 [3,448,248–3,465,323]	FAM_01585^a
66	contig9.region008	NRPS-like	Contig 9 [3,510,825–3,548,097]	FAM_01586^a
67	contig9.region009	T1PKS	Contig 9 [4,771,912–4,812,897]	FAM_01262
68	contig9.region010	T1PKS	Contig 9 [5,251,051–5,297,281]	FAM_01588^a
69	contig9.region011	Indole	Contig 9 [5,715,029–5,736,413]	FAM_01589^a
70	contig9.region012	NRPS-like	Contig 9 [5,819,784–5,862,074]	FAM_01502
71	contig9.region013	T1PKS	Contig 9 [5,919,206–5,978,029]	FAM_01591
72	contig9.region014	NRPS, T1PKS	Contig 9 [6,129,121–6,199,192]	FAM_01592^a	Leporin B (BGC0001445)
73	contig9.region015	NRPS	Contig 9 [6,205,218–6,267,181]	FAM_01593^a	Destruxin A (BGC0000337)
74	contig9.region016	Terpene	Contig 9 [6,317,976–6,338,626]	FAM_01594^a
75	contig9.region017	NRPS-like, T1PKS, NRPS	Contig 9 [6,449,891–6,543,804]	FAM_01271	Ascochlorin (BGC0001923)
76	contig9.region018	T1PKS	Contig 9 [6,595,828–6,658,103]	FAM_01596^a
77	contig9.region019	T1PKS	Contig 9 [6,672,756–6,752,769]	FAM_01597^a
78	contig9.region020	NRPS	Contig 9 [6,801,947–6,848,793]	FAM_01598^a
79	scaffold12.region001	NRPS	Scaffold 12 [739,653–774,62]	FAM_01016	Dimethylcoprogen (BGC0001249)
80	scaffold12.region002	T1PKS	Scaffold 12 [792,59–838,101]	FAM_01600^a
81	scaffold12.region003	NRPS	Scaffold 12 [1,147,823–1,226,560]	FAM_01601^a
82	scaffold12.region004	NRPS, T1PKS	Scaffold 12 [1,278,228–1,361,597]	FAM_01231
83	scaffold12.region005	NRPS, T1PKS	Scaffold 12 [1,716,476–1,767,455]	FAM_01230
84	scaffold12.region006	NAPAA, NRPS	Scaffold 12 [2,898,411–2,951,408]	FAM_01604^a
85	scaffold12.region007	Terpene	Scaffold 12 [3,214,332–3,235,701]	FAM_01605^a
86	scaffold12.region008	T1PKS	Scaffold 12 [3,363,240–3,402,845]	FAM_01606^a
87	scaffold12.region009	T1PKS, NRPS	Scaffold 12 [3,418,472–3,502,365]	FAM_01607
88	scaffold12.region010	NRPS	Scaffold 12 [3,729,321–3,784,772]	FAM_01459	Apicidin (BGC0000304)
89	scaffold12.region011	T1PKS	Scaffold 12 [3,809,533–3,850,712]	FAM_01609
90	scaffold12.region012	NRPS-like, T1PKS	Scaffold 12 [3,869,049–3,916,556]	FAM_01247	Swainsonine (BGC0001793)
91	scaffold17.region001	T1PKS	Scaffold 17 [50,606–93,739]	FAM_01611^a
92	scaffold17.region002	NRPS	Scaffold 17 [113,167–165,135]	FAM_01481
93	scaffold17.region003	T1PKS	Scaffold 17 [181,389–227,613]	FAM_01613^a
94	scaffold17.region004	NRPS	Scaffold 17 [1,490,267–1,553,136]	FAM_01480
95	scaffold17.region005	T1PKS, NRPS	Scaffold 17 [1,664,879–1,744,092]	FAM_01615	Pyranonigrin E (BGC0001124)
96	scaffold17.region006	NRPS, T1PKS	Scaffold 17 [3,373,385–3,426,940]	FAM_01616^a
97	scaffold17.region007	NRPS, terpene	Scaffold 17 [3,451,272–3,512,235]	FAM_01617
98	scaffold17.region008	T1PKS, NRPS	Scaffold 17 [3,837,995–3,950,986]	FAM_01618^a	Verticillin (BGC0001820)
99	scaffold17.region009	T1PKS, NRPS	Scaffold 17 [4,151,159–4,228,823]	FAM_01475
100	scaffold17.region010	NRPS-like	Scaffold 17 [4,307,093–4,364,974]	FAM_01620^a
101	scaffold17.region011	Other	Scaffold 17 [4,416,112–4,457,005]	FAM_01621^a
102	scaffold17.region012	Terpene	Scaffold 17 [4,503,384–4,504,782]	FAM_01622^a
103	scaffold17.region013	T1PKS	Scaffold 17 [4,566,858–4,615,436]	FAM_01623	Aurofusarin (BGC0002709)
104	scaffold17.region014	T1PKS, NRPS-like	Scaffold 17 [4,653,857–4,729,974]	FAM_01474	Naphthopyrone (BGC0000107)
105	scaffold17.region015	NRPS	Scaffold 17 [4,750,437–4,815,420]	FAM_01474
106	scaffold17.region016	Terpene	Scaffold 17 [4,820,426–4,842,031]	FAM_01626^a

Their family classification is provided. Additionally, the most closely related known cluster and its corresponding MIBiG accession are shown.

^aSingletons.