Table 3.
The average rmsd of the predicted structures on the Nanobody dataset
| rmsd | ||||
|---|---|---|---|---|
| Fr | CDR-1 | CDR-2 | CDR-3 | |
| AlphaFold2 (MSA) | 0.73 | 2.05 | 1.15 | 4.01 |
| AlphaFold2 (Single) | 9.34 | 12.67 | 12.39 | 17.87 |
| HelixFold-Single | 0.86 | 1.99 | 1.18 | 4.2 |
| OmegaFold | 0.71 | 2.02 | 1.12 | 3.77 |
| ESMFold | 0.80 | 2.06 | 1.12 | 4.23 |
| DeepAb | 0.92 | 2.38 | 1.34 | 8.76 |
| IgFold | 0.82 | 1.93 | 1.29 | 4.27 |
| EquiFold | 2.30 | 3.23 | 2.61 | 7.19 |
| RaptorX-Single | 0.83 | 2.19 | 1.14 | 4.06 |
| RaptorX-Single-Ab | 0.82 | 1.78 | 1.06 | 3.50 |