Table 1.
Physiochemical properties of the HaCCO gene family
| Gene ID | Accession | Chromosome | Direction | Size (AA) | pI | Mw | Instability Index | GRAVY | ||
|---|---|---|---|---|---|---|---|---|---|---|
| Name | Phytozome ID | no. | Location (Base pairs) | mRNA (CDS) | Peptide | (Da) | ||||
| HaNCED1 | HanXRQChr10g0301261 | 10 | 161983332.161985151 | R | 1779 | 592 | 5.9 | 65303.9 | 38.74 | -0.28 |
| HaCCD2 | HanXRQChr16g0524481 | 16 | 153942754.153945230 | F | 972 | 323 | 6.12 | 37413.92 | 42.02 | -0.26 |
| HaCCD3 | HanXRQChr16g0531971 | 16 | 183023700.183027192 | F | 1794 | 597 | 6.43 | 66785.29 | 39.03 | -0.236 |
| HaCCD4 | HanXRQChr16g0524461 | 16 | 153858183.153875270 | F | 1413 | 470 | 8.96 | 53826.43 | 35.4 | -0.235 |
| HaNCED5 | HanXRQChr04g0114331 | 4 | 126335282.126337046 | F | 1764 | 587 | 6.24 | 65349.41 | 44.16 | -0.287 |
| HaCCD6 | HanXRQChr09g0254251 | 9 | 124461946.124464016 | F | 1713 | 570 | 6.53 | 63774.96 | 29.44 | -0.204 |
| HaCCDL7 | HanXRQChr13g0401841 | 13 | 93083247.93083976 | F | 459 | 152 | 9.44 | 17296.23 | 29.92 | 0.026 |
| HaCCD8 | HanXRQChr13g0399061 | 13 | 81577092.81579909 | R | 1791 | 596 | 6.42 | 66681.64 | 30.67 | -0.134 |
| HaCCDL9 | HanXRQChr13g0401881 | 13 | 93290532.93303998 | R | 1767 | 588 | 5.93 | 66364.69 | 39.9 | -0.252 |
| HaCCDL10 | HanXRQChr13g0401851 | 13 | 93087583.93095196 | F | 819 | 272 | 5.41 | 31140.49 | 35.73 | -0.231 |
| HaCCD11 | HanXRQChr13g0422761 | 13 | 184631456.184638343 | F | 1842 | 613 | 6.08 | 69410.86 | 40.97 | -0.316 |
| HaCCD12 | HanXRQChr17g0562991 | 17 | 169800946.169807303 | R | 1632 | 543 | 5.82 | 61021.10 | 32.84 | -0.271 |
| HaCCDL13 | HanXRQChr17g0538671 | 17 | 17661688.17669699 | R | 654 | 217 | 5.90 | 25088.54 | 28.37 | -0.392 |
| HaCCDL14 | HanXRQChr17g0538661 | 17 | 17659198.17661638 | R | 702 | 233 | 6.18 | 26289.15 | 24.26 | -0.263 |
| HaNCED15 | HanXRQChr15g0480901 | 15 | 64124171.64126954 | F | 1719 | 572 | 6.35 | 64046.22 | 43.78 | -0.282 |
| HaNCED16 | HanXRQChr15g0492301 | 15 | 136149925.136151710 | R | 1785 | 594 | 5.85 | 65736.71 | 41.74 | -0.248 |
| HaCCD17 | HanXRQChr02g0050571 | 2 | 143584021.143587868 | F | 1662 | 553 | 5.50 | 61393.76 | 33.06 | -0.279 |
| HaNCED18 | HanXRQChr02g0059541 | 2 | 179037096.179038851 | F | 1755 | 584 | 7.61 | 64776.21 | 36.87 | -0.28 |
| HaNCED19 | HanXRQChr11g0329931 | 11 | 40785921.40787682 | F | 1761 | 586 | 6.51 | 64537.79 | 39.97 | -0.246 |
| HaCCD20 | HanXRQChr08g0227631 | 8 | 90476375.90479305 | F | 1779 | 592 | 5.70 | 64803.8 | 43.07 | -0.155 |
| HaCCD21 | HanXRQChr00c0025g0571121 | 0 | 19619.23105 | R | 1674 | 557 | 6.05 | 62082.38 | 35.07 | -0.33 |