Fig 7. Pairwise comparisons with the multivariate Fisher’s noncentral hypergeometric distribution.

Comparison of the results of weighted enrichment and the standard gene list method shows that the weighted method provides unique results (a) while having generally good agreement with the gene list method (b) compared to the unweighted step method (Fig 5B). Comparison between the weighted and unweighted methods shows that the weighted method produces more results than the unweighted step method (c) while still having relatively good capture rates of results from the unweighted method (d).