Table 2.
Summary of errors in plasmid assemblies compared to the reference sequence, excluding true deviations.
| Assembly Type | # Successful Assemblies | # Assemblies with Indels ⩽ 5 bp | # Assemblies with Indels > 5 bp | # Assemblies with Mismatches |
|---|---|---|---|---|
| Short-Read | 53 | 9 | 10 | 8 |
| Long-Read | 68 | 25 | 6 | 19 |
| Hybrid | 56 | 8 | 2 | 8 |