TABLE 1:
Gene | Study Population | Metformin dose | Variant | Phenotype |
---|---|---|---|---|
SLC22A1 (OCT1) | 20 healthy volunteers | 2 doses 1000mg and 850 mg | R61C (rs12208357), G401S (rs34130495), 420del (rs72552763 and G4665R/rs34059508) | Impaired response to oral glucose tolerance test (Shu et al., 2007) |
20 healthy volunteers | 2 doses 1000mg and 850 mg | R61C (rs12208357), G401S (rs34130495), 420del (rs72552763 and G4665R/rs34059508) | Higher AUC, higher Cmax, lower oral volume of distribution (Shu et al., 2008) | |
103 healthy male Caucasian volunteers | 1 dose of 500 mg | G465R | Increased renal clearance and decreased hepatic uptake (Tzvetkov et al., 2009) | |
1531 GoDARTS subjects with type 2 diabetes | Average dose 1260 mg/day | R61C and M420del | No effect on HbA1c reduction(K. Zhou et al., 2009) | |
159 Danish South Danish Diabetes Study participants with type 2 diabetes | 1000 mg twice a day | R61C (rs12208357), G401S (rs34130495), 420del (rs72552763 and G4665R/rs34059508) | Decrease in trough-steady state metformin concentration and less change in HbA1c over 6 months (Christensen et al., 2011) | |
1915 metformin tolerant and 251 metformin intolerant GoDARTS participants | Average dose 1000 mg/day | R61C (rs12208357), G401S (rs34130495), 420del (rs72552763 and G4665R/rs34059508) | 2 reduced function alleles associated with metformin intolerance. Higher odds of intolerance in the presence of OCT-1 interacting drugs (Dujic et al., 2015) | |
102 subjects with type 2 diabetes from Rotterdam Study | Average dose 677 mg/day | rs622342 | Less reduction in HbA1c level(Becker et al., 2009b) | |
148 drug naïve Caucasian patients with type 2 diabetes | Average dose ~ 1400mg/day | rs622342 | No effect on HbA1c reduction (Tkac et al., 2013) | |
990 multi-ethnic DPP participants with pre-diabetes | 850 mg twice a day | rs622342 | No evidence of interaction with metformin (Jablonski et al., 2010) | |
SLC22A2(OCT2) | 15 healthy Chinese participants | A single dose of 500 mg | 808G>T | Reduced metformin renal tubular clearance (Wang et al., 2008) |
26 healthy Korean subjects | A single dose of 500 mg of metformin | 596C>T, 602C>T, and 808G>T | Higher Cmax, AUC and lower renal clearance (Song et al., 2008) | |
23 healthy Caucasian and African American volunteers | A single dose of 850 mg of metformin | 808G>T | Decreased renal clearance and renal clearance by secretion of metformin (Chen et al., 2009) | |
371 Danish participants with type 2 diabetes from South Danish Diabetes Study | 1000 mg twice a day | rs316019 | No effect on metformin concentration or HbA1c response (Christensen et al., 2011) | |
990 multi-ethnic DPP participants with pre-diabetes | 850 mg twice a day | rs316019 | No evidence of interaction with metformin (Jablonski et al., 2010) | |
SLC47A1(MATE1) and SLC47A2(MATE2) | 57 healthy volunteers | 2 doses 1000mg and 850 mg | rs2252281 (MATE1) rs12943590 (MATE2) |
Renal and secretory clearance of metformin higher in MATE2 carriers who were MATE1 reference. Enhanced OGTT response with MATE1, reduced response with MATE2 (Stocker et al., 2013) |
145 patients with type 2 diabetes | Average dose 938 mg/day | rs2252281 (MATE1) | Greater change in HbA1c level with MATE1(Stocker et al., 2013) | |
253 Caucasian and African American subjects with type 2 diabetes | Average dose 938 mg/day | rs12943590 (MATE2-K) | Less reduction in HbA1c (Choi et al., 2011) | |
116 Caucasian subjects with type 2 diabetes | Average dose 741 mg | rs2289669 (MATE1) | Decrease in HbA1c (Becker et al., 2009a) | |
148 drug naïve Caucasian patients with type 2 diabetes | Average dose ~ 1400mg/day | rs2289669 (MATE1) | Greater reduction in HbA1c(Tkac et al., 2013) | |
990 multi-ethnic DPP participants with pre-diabetes | 850 mg twice a day | rs8065082 (In LD r2 0.8 with rs2289669) (MATE1) | Poorer response to metformin(Jablonski et al., 2010) | |
371 Danish participants with type 2 diabetes from South Danish Diabetes Study | 1000 mg twice a day | rs2252281, rs2289669 (MATE1) rs34399035 (MATE2) |
No effect on metformin concentration or change in HbA1c (Christensen et al., 2011) | |
ATM | 1,024 Scottish subjects with type 2 diabetes (GWAS Discovery cohort) 2,896 Caucasian subjects with type 2 diabetes (2 Replication cohorts) |
The average daily dose during the 3 months prior to the minimum HbA1c was achieved | rs11212617 (intron of C11orf65), in LD with r2>0.8 with SNPs in several genes including ATM, NPAT, KDELC2. | Minor C-allele of rs11212617 is associated with treatment success (K. Zhou et al., 2011). Treatment success was defined as achieving HbA1c <7% in the first 18 months of metformin initiation (n = 3,920, P = 2.9×10−9, odds ratio = 1.35). |
SLC2A2 (GLUT2) | 3,103 Scottish subjects with type 2 diabetes (GWAS Discovery cohort) 7,454 Caucasian subjects with type 2 diabetes (9 Replication cohorts) 2,526 Non-European subjects with type 2 diabetes (3 different ethnic groups) |
The average daily dose during the 3 months prior to the minimum HbA1c was achieved | rs8192675 (intron of SLC2A2) | Minor C-allele of rs8192675 is associated with greater response to metformin (K. Zhou et al., 2016). Response to metformin was defined as baseline HbA1c minus the minimum treatment HbA1c in the first 18 months of metformin initiation (n = 10,557 Caucasians, P = 2.0×10−8, beta = 0.075 (baseline-adjusted model); P=6.6×10−14, beta=0.17 (baseline non-adjusted model)). Also significant in the combined non-European subjects (n = 2,566 Non-Europeans, P = 0.006, beta = 0.077 (baseline-adjusted model); P = 0.005, beta = 0.15 (baseline non-adjusted model)). Minor C-allele of rs8192675 is associated with lower SLC2A2 transcript levels in human liver tissue samples (n=1,226, P<5×10−8)) and other tissues (fibroblasts, islet, intestine) (K. Zhou et al., 2016) |