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. 2024 Mar 13;92(4):e00505-23. doi: 10.1128/iai.00505-23

TABLE 2.

Primers used in this study

Primer name Primer sequence (5′ to 3′) Target
dinJ-yafQ-F AGGGGAAAAGGGTGGTGA Co-transcribed
dinJ-yafQ-R CGACGAAACGCTGAAGGA Co-transcribed
dinJ-up-F GAGCGGATAACAATTTGTGGAATCCCGGGATGGAGGTTCACGGCGGGACGCATAA Deletion mutant
dinJ-up-R CCCATAGTCACATCGATTAGTCTCCTGTACTGTGT Deletion mutant
dinJ-down-F CTAATCGATGTGACTATGGGGCAAAGGGAAATTGA Deletion mutant
dinJ-down-R AGCGGAGTGTATATCAAGCTTATCGATACCGCAGGTGTTAGGGCTTATCTATTCC Deletion mutant
dinJ-in-F ATGTCCTGGCTGAAATGGGG Deletion mutant
dinJ-in-R ATCAACGCCAGCTTCGCTAT Deletion mutant
dinJ-out-F AGCCGAACGAAAGCGAAGAAAC Deletion mutant
dinJ-out-R CCGCAATCTGCTGTTACTCAATCA Deletion mutant
pCX340-F AGACAATCTGTGTGGGCACTCGACC FRET
pCX340-R TTCTGAGAATAGTGTATGCGGCGAC FRET
pCX340-dinJ-F AATAAGGAGGAATAACATATGATGGCTGCAAATGCGCTTGTTCGTG FRET
pCX340-dinJ-R CGAATTCTCCGCGGAGGTACCGATCCCTAACTGGTCAAACAAA FRET