Skip to main content
. 1998 Sep;72(9):7692–7696. doi: 10.1128/jvi.72.9.7692-7696.1998

TABLE 1.

Sequences of oligonucleotides used for PCR amplifications and sequencinga

Primer, position Sequence 5′→3′ Use
412-22f CCTGCTGCTATGCCTCATCTTC Sequencing
433-22r GAAGATGAGGCATAGCAGCAGG PCR and sequencing
477-23r GGACAAACGGGCAACATACCTTG PCR
685-20f GCCATTTGTTCAGTGGTTCG Sequencing
720-21r GTGGGGGAAAGCCCTACGAAC Sequencing
1276-22r CCGCAGTATGGATCGGCAGAGG PCR and sequencing
1303-21r TGCGAGCAAAACAAGCGGCTA PCR
1394-23f CCAACTGGATCCTGCGCGGGACG Diagnostic PCR
1425-23f TTACGTCCCGTCGGCGCTGAATC Diagnostic PCR
1673-24r GAGTCCAAGAGTCCTCTTATGTAA Diagnostic PCR
1701-20r CCTCAAGGTCGGTCGTTGAC Diagnostic PCR
2045-23f TCACCTCACCATACNGCACTCAG PCR
2694-20f GGCATTAAACCTTATTATCC PCR
2360-20f CGAGGCAGGTCCCCTAGAAG PCR
2382-21f GAACTCCCTCGCCTCGCAGAC PCR
2724-25f GTTAATCATTACTTCCAAACYAGAC PCR and sequencing
2850-22r GTAGCTCTTGTTCCCAAGAATA Sequencing
3100-35fb GGCATACTACAAGCTTTGCCAGCAA ATCCGCCTCC PCR
3207-21f GGCCATGCAGTGGAAC/TTCCAC Sequencing
3221-21r TTCCACTGCATGGCCTGAGGA
a

Sequences are numbered with regard to sequence hvhepb (18) starting at the EcoRI restriction site. Numbers after the dashes specify the length of the oligonucleotides; f means forward, or sense, orientation, and r means reverse, or antisense, orientation. 

b

The HindIII restriction site is underlined.