TABLE 1.
Primer, position | Sequence 5′→3′ | Use |
---|---|---|
412-22f | CCTGCTGCTATGCCTCATCTTC | Sequencing |
433-22r | GAAGATGAGGCATAGCAGCAGG | PCR and sequencing |
477-23r | GGACAAACGGGCAACATACCTTG | PCR |
685-20f | GCCATTTGTTCAGTGGTTCG | Sequencing |
720-21r | GTGGGGGAAAGCCCTACGAAC | Sequencing |
1276-22r | CCGCAGTATGGATCGGCAGAGG | PCR and sequencing |
1303-21r | TGCGAGCAAAACAAGCGGCTA | PCR |
1394-23f | CCAACTGGATCCTGCGCGGGACG | Diagnostic PCR |
1425-23f | TTACGTCCCGTCGGCGCTGAATC | Diagnostic PCR |
1673-24r | GAGTCCAAGAGTCCTCTTATGTAA | Diagnostic PCR |
1701-20r | CCTCAAGGTCGGTCGTTGAC | Diagnostic PCR |
2045-23f | TCACCTCACCATACNGCACTCAG | PCR |
2694-20f | GGCATTAAACCTTATTATCC | PCR |
2360-20f | CGAGGCAGGTCCCCTAGAAG | PCR |
2382-21f | GAACTCCCTCGCCTCGCAGAC | PCR |
2724-25f | GTTAATCATTACTTCCAAACYAGAC | PCR and sequencing |
2850-22r | GTAGCTCTTGTTCCCAAGAATA | Sequencing |
3100-35fb | GGCATACTACAAGCTTTGCCAGCAA ATCCGCCTCC | PCR |
3207-21f | GGCCATGCAGTGGAAC/TTCCAC | Sequencing |
3221-21r | TTCCACTGCATGGCCTGAGGA |
Sequences are numbered with regard to sequence hvhepb (18) starting at the EcoRI restriction site. Numbers after the dashes specify the length of the oligonucleotides; f means forward, or sense, orientation, and r means reverse, or antisense, orientation.
The HindIII restriction site is underlined.