Table 1.
Identification of polyamine metabolism genes in the litchi genome. The genes marked gray were not expressed in the EC of litchi.
| Family | Pfam | Description | Gene ID |
|---|---|---|---|
| ODC | PF00728 | C-terminal sheet domain | LITCHI001849.m1 |
| PF02784 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain | LITCHI010045.m1 | |
| ADC | PF02784 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain | LITCHI001935.m1 |
| SAMDC | PF01536 | Adenosylmethionine decarboxylase | LITCHI014637.m1 |
| LITCHI005415.m1 | |||
| LITCHI019298.m1 | |||
| SPDS/SPMS | PF01564 | Spermine/spermidine synthase domain | LITCHI014771.m5 |
| PF17284 | Spermidine synthase tetramerisation domain | LITCHI014771.m1 | |
| LITCHI017380.m2 | |||
| LITCHI017380.m1 | |||
| LITCHI009625.m1 | |||
| LITCHI009625.m3 | |||
| LITCHI022355.m1 | |||
| LITCHI004977.m1 | |||
| DAO | PF01179 | Copper amine oxidase, enzyme domain | LITCHI014772.m1 |
| PF02727 | Copper amine oxidase, N2 domain | LITCHI014780.m1 | |
| PF02728 | Copper amine oxidase, N3 domain | LITCHI014775.m1 | |
| LITCHI014781.m1 | |||
| LITCHI022471.m2 | |||
| LITCHI022850.m1 | |||
| LITCHI004876.m1 | |||
| PAO | PF01593 | Flavin containing amine oxidoreductase | LITCHI015688.m7 |
| LITCHI015688.m1 | |||
| LITCHI017627.m1 | |||
| LITCHI013235.m1 | |||
| LITCHI026697.m1 | |||
| LITCHI027276.m2 | |||
| LITCHI027276.m5 | |||
| LITCHI001171.m1 | |||
| LITCHI000635.m2 | |||
| LITCHI000635.m1 | |||
| LITCHI002066.m1 | |||
| LITCHI003677.m1 | |||
| LITCHI009613.m1 | |||
| LITCHI008116.m1 | |||
| LITCHI008116.m2 | |||
| LITCHI010016.m1 | |||
| LITCHI010183.m1 | |||
| LITCHI022368.m1 | |||
| LITCHI020715.m1 | |||
| LITCHI020181.m4 | |||
| LITCHI020181.m1 | |||
| LITCHI004421.m1 | |||
| LITCHI019019.m1 |