Table 2. Viruses identified in this study.
| Virus name | Family | Genus | Closest relative (Accession ID | Name) | Coverage (%) | Identity (%) |
Encoded protein | No.a |
| aNumber of near-complete genomes of the virus obtained in this study. | |||||||
| Hepacivirus TuHV1 | Flaviviridae | Hepacivirus | YP_009553586 | Hepacivirus P isolate RHV-GS2015 | 97 | 52.49 | 7 | |
| Hepacivirus TuHV2 | Flaviviridae | Hepacivirus | OX394189 | Northern treeshrew hepacivirus | 100 | 95.70 | 7 | |
| Hepatovirus TuHAV | Picornaviridae | Hepatovirus | NC_028981 | Tupaia hepatovirus A isolate TN1 | 99 | 94.43 | 2 | |
| Hepevirus TuHEV | Hepeviridae | unclassified | KR905549 | Hepeviridae isolate Yunnan-2013 | 99 | 95.37 | 1 | |
| Parvovirus TuPaV | Parvovirinae | Erythroparvovirus | NC_038543 | Chipmunk parvovirus | 80 | 66.50 | 1 | |
| Picornavirus TuPiV | Picornaviridae | Mischivirus | APY24210 | Canine picornavirus isolate A128thr | 80 | 51.98 | 5 | |
| Rotavirus TuRVA | Sedoreoviridae | Rotavirus | OK651080 | RVA/Horse-wt/IND/ERV4/2017/G3P[3] | 99 | 91.89 | VP1 | 2 |
| ON221572 | RVA/Bat-tc/CHN/CHYNC82/2016/G3P3 | 99 | 92.86 | VP2 | ||||
| LC576610 | RVA/Human-wt/THA/MS2015-1-0001/G3P[10] | 100 | 94.35 | VP3 | ||||
| AB055967 | RVA/Goat/KOR/GRV/1998/G3P5[3] | 99 | 87.24 | VP4 | ||||
| LC328216 | RVA/Cat-tc/JPN/FRV303/1993/G3P[3] | 100 | 81.04 | VP6 | ||||
| MK161358 | RVA/Human-wt/THA/2CR23/2016/G3P[8] | 99 | 80.93 | VP7 | ||||
| ON221577 | RVA/Bat-tc/CHN/CHYNC82/2016/G3P3 | 100 | 86.07 | NSP1 | ||||
| JX036372 | RVA/Horse-wt/ARG/E3198/2008/G3P[3] | 100 | 92.88 | NSP2 | ||||
| KU597752 | RVA/Human-wt/CHN/M2-102/2014/G3P[3] | 100 | 91.35 | NSP3 | ||||
| OP963645 | RVA/Bat/2018/S18CXBatR24 | 100 | 93.57 | NSP4 | ||||
| KU597754 | RVA/Human-wt/CHN/M2-102/2014/G3P[3] | 100 | 98.77 | NSP5 | ||||
| Mammalian orthoreovirus TuMRV |
Spinareoviridae | Orthoreovirus | KM087105 | MRV2/Bat/CHN/RpMRV-YN2012/2012 | 100 | 96.45 | lambda-3 | 2 |
| JN799427 | MRV/Pig/AUS/729/1998 | 100 | 92.03 | lambda-2 | ||||
| MG451073 | MRV3/TS/China/2012 | 100 | 96.29 | lambda-1 | ||||
| MG451065 | MRV1/TS/China/2011 | 100 | 98.31 | mu-2 | ||||
| MG451064 | MRV1/TS/China/2011 | 100 | 96.06 | mu-1 | ||||
| OP057406 | MRV1 40/Bat/Kansas USA/2018 | 100 | 91.18 | mu-NS | ||||
| KP185123 | MRV1/T1/T28/KM/2013 | 99 | 94.05 | sigma-1 | ||||
| OP963631 | MRV/Bat/2017/S17BSBatR47 | 99 | 94.90 | sigma-2 | ||||
| MG451079 | MRV3/TS/China/2012 | 99 | 95.51 | sigma-NS | ||||
| MG451080 | MRV3/TS/China/2012 | 99 | 94.57 | sigma-3 | ||||