TABLE 2.
Top GWS differential methylated (5mC) CpG sites.
| Gene | Chr | BP | Strand | meth.diff | p value | q value |
|---|---|---|---|---|---|---|
| GNPNAT1 | chr14 | 52791636 | − | 2.73 | 3.93E-12 | 7.12E-06 |
| CYP26B1 | chr2 | 72147339 | + | 2.02 | 3.17E-11 | 2.87E-05 |
| PCDH8P1 | chr13 | 53201122 | − | 2.21 | 9.86E-11 | 5.95E-05 |
| SNORA57 | chr11 | 62665457 | + | 3.04 | 2.46E-10 | 7.42E-05 |
| FAM163B | chr9 | 1.34E+08 | + | 2.55 | 2.03E-10 | 7.42E-05 |
| KEAP1 | chr19 | 10503028 | − | 3.88 | 1.33E-09 | 0.000142 |
| STAM2 | chr2 | 1.52E+08 | + | 2.55 | 1.20E-09 | 0.000142 |
| ARX | chrX | 25013092 | − | 3.48 | 1.22E-09 | 0.000142 |
| AL033528.1 | chr1 | 25922969 | − | 2.70 | 1.76E-09 | 0.000162 |