Table 1.
Essential features and references of the analysed datasets
| Dataset ID | GEO series | GEO sample ID: Ribo-seq | GEO sample ID: RNA-seq | Culture medium |
|---|---|---|---|---|
| D1 | GSE91068 | GSM2420488 | GSM2420486 | Synthetic Defined (SD) |
| D2 | GSE134152 | GSM3938059 | GSM3938057 | Synthetic Defined (SD) |
| D3 | GSE91068 | GSM2420489 | GSM2420487 | Methionine Restricted |
| D4 | GSE134152 | GSM3938060 | GSM3938058 | Glucose Restricted |
| D5 | GSE13750 | GSM346111 | GSM346117 | Rich (YEPD) (1) |
| D6 | GSE13750 | GSM346114 | GSM346118 | Rich (YEPD) (2) |
| D7 | GSE13750 | GSM346115 | GSM346120 | Amino Acid Starvation (1) |
| D8 | GSE13750 | GSM346116 | GSM346122 | Amino Acid Starvation (2) |
Column 1: dataset’s reference ID, used in this paper; the IDs of the datasets used as reference in the comparative analysis (S. cerevisiae cultured in standard conditions) are highlighted in bold. Column 2: GSE series number. Column 3: GSM ID of the Ribo-seq data. Column 4 is the GSM ID of the corresponding mRNA data. Column 5: culture medium.