Table 1.
Exon no. (bp) | Exon size | Sequence at exon-intron junctiona | ||
---|---|---|---|---|
5′ Splice donor | Intron size (kb) | 3′ Splice acceptor | ||
11 | 256 | GGATGAG gtgatgc | 1.4 | catttag CATGTGG |
12b | 93 | TACCCAG gtttgtt | 0.6 | cttgcag GCTTAAT |
13 | 198 | TTACCAC gtgagtc | 4.5 | atgatag GCATATT |
14 | 69 | ACCTCGT gtaggta | 0.9 | attccag AGCTTTT |
15 | 96 | TGCCCAG gtaagtt | 0.8 | atcatag CTGGTTG |
16 | 109 | ACTCCAG gtaaaac | 2.8 | ccctcag TATAACA |
17 | 92 | GAAAACG gtaagtg | 3 | tccttag GCTTTAG |
18 | 83 | CAAAACG gtatggt | 1 | cccacag TACTGGC |
19 | 65 | CATTCAG gtaaggg | 0.7 | ccctcag GGTAGAA |
10 | 85 | CCACAGA gtgagtc | 0.8 | tctgcag ATGTTGA |
11 | 138 | AGCTATG gtgagta | 2.7 | tctttag ACTACTG |
12 | 81 | GTTACAG gtactca | 0.6 | attgcag ATTTTAG |
13 | 107 | GGTCAAG gtgcgtg | 11.5 | gccacag ACAACCA |
14 | 147 | GGCCCAG gtaggga | 2.2 | ctggcag GTGTTTT |
15 | 68 | CAAAGAT gtatgta | 0.5 | tgaatag CTCACCA |
16 | 88 | AGAAAAG gtgggct | 0.8 | cctatag GTTTAAC |
17 | 88 | TACAAAG gtgggtg | 0.5 | ctcttag GGAATTT |
18 | 112 | AGTAAAG gttagtg | 0.7 | ttttcag GACTGGG |
19 | 117 | TAATACG gtgaatt | 0.1 | tgtgcag ATCATAA |
20 | 64 | CATCTAG gtatgcc | 0.7 | ttttcag GACATTG |
21 | 447 | AATGGTG |
Uppercase and lowercase letters indicate exon and intron sequences respectively; conserved splice donor and acceptor and acceptor sites (gt … ag) are bolded.
The open reading frame starts from this exon.