Table 2.
Polymorphic published CD4+ T-cell epitopes and flanking regions analyzed in vitro
| EBNA1-IAE | EBNA1-AIP | EBNA1-KTS | EBNA3C-ENP | |
|---|---|---|---|---|
| HLA | DQB1*0402 | DRB1*1301 | DRB1*1101 | DRB1*0801 |
| Epitope coordinates (B95.8) | AA 481–500 | AA 527–541 | AA 514–528 | AA 325–339 |
| B95.8 |
PKFEN IAEGLRALLARSHVE RTTDE |
RGTAL AIPQCRLTPLSRLPF GMAPG |
VYGGS KTSLYNLRRGTALAI PQCRL |
NAPPN ENPYHARRGIKEHVI QNAFR |
| M81 |
PKFEN IAEGLR V LLARSHVE RTTEE |
RGIAL A V PQCR I TPLSRLPF GMAPG |
VYGGS KTSLYNLRRG I ALA V PQCRI |
NAPPN ENPYHARRGIK D HVI QNAFR |
| AG876 |
QKFEN IAEGLR L LLAR C HVE RTTED |
* |
VYGGS KTSLYNLRRG IG LAI PQCRL |
NAPPN ENPYHARRGIKE Q VI QKAFL |
*Same as B95.8 sequence
AA amino acids