Table 1.
RNA target | Probe/primer | Sequence |
---|---|---|
28 S | Probe | 5′-(HEX)-AGGACCGCTACGGACCTCCACCA-(TAMRA)-3′ |
F | 5′-GGCGAAGCCAGAGGAAACT-3′ | |
R | 5′-GACGACCGATTTGCACGTC-3′ | |
IL-2 | Probe | 5′-(FAM)-ACTGAGACCCAGGAGTGCACCCAGC-(TAMRA)-3′ |
F | 5′-TTGGAAAATATCAAGAACAAGATTCATC-3′ | |
R | 5′-TCCCAGGTAACACTGCAGAGTTT-3′ | |
IL-4 | Probe | 5′-(FAM)-AGCAGCACCTCCCTCAAGGCACC-(TAMRA)-3′ |
F | 5′-AACATGCGTCAGCTCCTGAAT-3′ | |
R | 5′-TCTGCTAGGAACTTCTCCATTGAA-3′ | |
IL-6 | Probe | 5′-(FAM)-AGGAGAAATGCCTGACGAAGCTCTCCA-(TAMRA)-3′ |
F | 5′-GCTCGCCGGCTTCGA-3′ | |
R | 5′-GGTAGGTCTGAAAGGCGAACAG-3′ | |
IL-8 | Probe | 5′-(FAM)-TCTTTACCAGCGTCCTACCTTGCGACA-(TAMRA)-3′ |
F | 5′-GCCCTCCTCCTGGTTTCAG-3′ | |
R | 5′-TGGCACCGCAGCTCATT-3′ | |
IL-10 | Probe | 5′-(FAM)-CGACGATGCGGCGCTGTCA-(TAMRA)-3′ |
F | 5′-CATGCTGCTGGGCCTGAA-3′ | |
R | 5′-CGTCTCCTTGATCTGCTTGATG-3′ | |
IL-12β | Probe | 5′-(FAM)-CTGAAAAGCTATAAAGAGCCAAGCAAGACGTTCT-(TAMRA)-3′ |
F | 5′-TGGGCAAATGATACGGTCAA-3′ | |
R | 5′-CAGAGTAGTTCTTTGCCTCACATTTT-3′ | |
IL-13a | Probe | 5′-(FAM)-CTGCCACAGTGCTGGACAACATGACCG-(TAMRA)-3′ |
F | 5′-CAAGGATCGGAAGCTGTCAGAG-3′ | |
R | 5′-GGCGGGCAGTTCGTCATG-3′ | |
IL-18 | Probe | 5′-(FAM)-CCGCGCCTTCAGCAGGGATG-(TAMRA)-3′ |
F | 5′-AGGTGAAATCTGGCAGTGGAAT-3′ | |
R | 5′-ACCTGGACGCTGAATGCAA-3′ | |
CTLA-4a | Probe | 5′-(FAM)-TTGTCTTCTCTGAATCGCTTTGCCCACG-(TAMRA)-3′ |
F | 5′-CAGCATCATCATCTCAGCCATTG-3′ | |
R | 5′-GCATTTTCACATAGACCCCAGTAG-3′ | |
GPR83a | Probe | 5′-(FAM)-TCCGCCACCAGCCTGTTCATCGTCA-(TAMRA)-3′ |
F | 5′-CGTCATCATCAAGAGCAAACGC-3′ | |
R | 5′-ACAAAACGAGCCAGTGTAAAAGG-3′ | |
IFN-γ | Probe | 5′-(FAM)-TGGCCAAGCTCCCGATGAACGA-(TAMRA)-3′ |
F | 5′- GTGAAGAAGGTGAAAGATATCATGGA-3′ | |
R | 5′-GCTTTGCGCTGGATTCTCA-3′ | |
SMAD7a | Probe | 5′-(FAM)-TCCCAGTAAGCCACCACGCACCAGT-(TAMRA)-3′ |
F | 5′-GCTCTCAGATTCTCAAGTTATTCAGG-3′ | |
R | 5′-CCGACCCACACGCATCTTC-3′ | |
TGFβ | Probe | 5′-(FAM)-ACCCAAAGGTTATATGGCCAACTTCTGCAT-(TAMRA)-3′ |
F | 5′-AGGATCTGCAGTGGAAGTGGAT-3′ | |
R | 5′-CCCCGGGTTGTGTGTTGGT-3′ |
F forward, R reverse
aDesigned during this work