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. 2008 Feb 7;57(8):1253–1262. doi: 10.1007/s00262-008-0460-2

Table 1.

PCR probes and primers (fluorophore)

RNA target Probe/primer Sequence
28 S Probe 5′-(HEX)-AGGACCGCTACGGACCTCCACCA-(TAMRA)-3′
F 5′-GGCGAAGCCAGAGGAAACT-3′
R 5′-GACGACCGATTTGCACGTC-3′
IL-2 Probe 5′-(FAM)-ACTGAGACCCAGGAGTGCACCCAGC-(TAMRA)-3′
F 5′-TTGGAAAATATCAAGAACAAGATTCATC-3′
R 5′-TCCCAGGTAACACTGCAGAGTTT-3′
IL-4 Probe 5′-(FAM)-AGCAGCACCTCCCTCAAGGCACC-(TAMRA)-3′
F 5′-AACATGCGTCAGCTCCTGAAT-3′
R 5′-TCTGCTAGGAACTTCTCCATTGAA-3′
IL-6 Probe 5′-(FAM)-AGGAGAAATGCCTGACGAAGCTCTCCA-(TAMRA)-3′
F 5′-GCTCGCCGGCTTCGA-3′
R 5′-GGTAGGTCTGAAAGGCGAACAG-3′
IL-8 Probe 5′-(FAM)-TCTTTACCAGCGTCCTACCTTGCGACA-(TAMRA)-3′
F 5′-GCCCTCCTCCTGGTTTCAG-3′
R 5′-TGGCACCGCAGCTCATT-3′
IL-10 Probe 5′-(FAM)-CGACGATGCGGCGCTGTCA-(TAMRA)-3′
F 5′-CATGCTGCTGGGCCTGAA-3′
R 5′-CGTCTCCTTGATCTGCTTGATG-3′
IL-12β Probe 5′-(FAM)-CTGAAAAGCTATAAAGAGCCAAGCAAGACGTTCT-(TAMRA)-3′
F 5′-TGGGCAAATGATACGGTCAA-3′
R 5′-CAGAGTAGTTCTTTGCCTCACATTTT-3′
IL-13a Probe 5′-(FAM)-CTGCCACAGTGCTGGACAACATGACCG-(TAMRA)-3′
F 5′-CAAGGATCGGAAGCTGTCAGAG-3′
R 5′-GGCGGGCAGTTCGTCATG-3′
IL-18 Probe 5′-(FAM)-CCGCGCCTTCAGCAGGGATG-(TAMRA)-3′
F 5′-AGGTGAAATCTGGCAGTGGAAT-3′
R 5′-ACCTGGACGCTGAATGCAA-3′
CTLA-4a Probe 5′-(FAM)-TTGTCTTCTCTGAATCGCTTTGCCCACG-(TAMRA)-3′
F 5′-CAGCATCATCATCTCAGCCATTG-3′
R 5′-GCATTTTCACATAGACCCCAGTAG-3′
GPR83a Probe 5′-(FAM)-TCCGCCACCAGCCTGTTCATCGTCA-(TAMRA)-3′
F 5′-CGTCATCATCAAGAGCAAACGC-3′
R 5′-ACAAAACGAGCCAGTGTAAAAGG-3′
IFN-γ Probe 5′-(FAM)-TGGCCAAGCTCCCGATGAACGA-(TAMRA)-3′
F 5′- GTGAAGAAGGTGAAAGATATCATGGA-3′
R 5′-GCTTTGCGCTGGATTCTCA-3′
SMAD7a Probe 5′-(FAM)-TCCCAGTAAGCCACCACGCACCAGT-(TAMRA)-3′
F 5′-GCTCTCAGATTCTCAAGTTATTCAGG-3′
R 5′-CCGACCCACACGCATCTTC-3′
TGFβ Probe 5′-(FAM)-ACCCAAAGGTTATATGGCCAACTTCTGCAT-(TAMRA)-3′
F 5′-AGGATCTGCAGTGGAAGTGGAT-3′
R 5′-CCCCGGGTTGTGTGTTGGT-3′

F forward, R reverse

aDesigned during this work