PCR detection of viral sequences from lymph node
biopsies 19 weeks after challenge of vaccine group 1 with
SHIVKU-1. Lymph node biopsies were performed; DNA was
extracted and used in nested PCR with oligonucleotides that amplified
the vpu gene of SHIVKU-1 as described in the
text. Aliquots of the nested PCR were run on a 1.5% agarose gel and
stained with ethidium bromide. Lanes 1 to 7, amplification of
vpu sequences from lymph node DNA of macaques 42105, 42107,
PLk, PPm, PDj, PNa, and PFy, respectively; lane 8, amplification of
vpu sequences from plasmid p3′SHIV (positive control for
full length vpu gene); lane 9, amplification of
vpu sequences from plasmid pDSDvpu (positive control for
truncated vpu gene); lane 10, amplification of
vpu sequences from plasmids p3′SHIV and pDSDvpu; lane 11,
amplification of vpu from uninfected PBMC DNA (negative
control).