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. 2023 Oct 23;42(8):1282–1295. doi: 10.1038/s41587-023-01964-9

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Extended Data Fig. 6 — (a) Down-sampling droplets from cell-pooled and conventional screens. (Left) Correlation of top 10,000 estimated effects with held-out validation data (y-axis) when varying droplet count (x-axis). (Right) Correlation of top 10,000 estimated effects with true effects in simulations of cell-pooled data with varying numbers of cells/droplet. (b) Down-sampling cells from guide-pooled screen stratified by # guides/cell. (Left) Correlation of top 10,000 estimated effects with held-out validation data (y-axis) when varying cell count (x-axis). (Right) Correlation of top 10,000 estimated effects with true effects in simulations of guide-pooled data.