Table IV.
Abundance of organism-restricted clusters and singlets
Family and singlet proteins with zero members in one of the two organisms are compared using the column arrangement and units of Table III. The percentage values are given in relation to the total number of proteins for each organism. The complete family information for the corresponding cluster intervals can be retrieved through predefined queries from the Advanced Search page of GCD.
| Cluster Size
|
Method
|
Arabidopsis Restricted
|
Rice Restricted
|
||
|---|---|---|---|---|---|
| Members | Clusters | Members | Clusters | ||
| 1 | BCL | 4,693 (16%) | 18,483 (31%) | ||
| HCL | 6,780 (23%) | 26,474 (44%) | |||
| 2–5 | BCL | 2,239 (8%) | 1,113 | 4,391 (7%) | 1,926 |
| HCL | 212 (0.7%) | 111 | 487 (0.8%) | 216 | |
| 6–10 | BCL | 429 (1%) | 60 | 911 (2%) | 123 |
| HCL | 51 (0.2%) | 8 | 258 (0.4%) | 35 | |
| 11–50 | BCL | 614 (2%) | 36 | 1,662 (3%) | 82 |
| HCL | 214 (0.7%) | 11 | 507 (0.9%) | 25 | |
| 51–100 | BCL | 85 (0.3%) | 1 | 483 (0.8%) | 8 |
| HCL | 77 (0.3%) | 1 | 716 (1%) | 10 | |
| ≥101 | BCL | 418 (1%) | 3 | 1,173 (2%) | 5 |
| HCL | 0 (0%) | 0 | 5,599 (9%) | 19 | |
| Sum | BCL | 8,478 (29%) | 1,213 | 27,103 (45%) | 2,144 |
| HCL | 7,334 (25%) | 131 | 34,041 (57%) | 305 | |