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. 2024 Apr 25;14:9497. doi: 10.1038/s41598-024-59713-0

Table 1.

Most enriched GO terms in RNS secretomes: biological process, molecular function, cellular component.

Name p value Genes from input Genes in annotation
Biological process
 GO:0030198 Extracellular matrix organization 1.85e–26 24 3338
 GO:0010810 Regulation of cell-substrate adhesion 5.96e–09 11 212
 GO:0051093 Negative regulation of developmental process 5.96e–09 18 983
 GO:0051241 Negative regulation of multicellular organismal process 1.32e–08 19 1231
 GO:0009611 Response to wounding 1.63e–08 14 532
 GO:0042060 Wound healing 2.17e–08 13 439
 GO:0030155 Regulation of cell adhesion 4.04e–08 15 712
 GO:0032963 Collagen metabolic process 2.41e–07 7 63
 GO:0050793 Regulation of developmental process 2.41e–07 24 2448
 GO:0030334 Regulation of cell migration 4.25e–07 15 865
Molecular function
 GO:0005201 Extracellular matrix structural constituent 6.76e–17 14 119
 GO:0005198 Structural molecule activity 2.90e–11 17 635
 GO:0005518 Collagen binding 3.32e–07 7 68
 GO:0061134 Peptidase regulator activity 1.74e–06 9 226
 GO:0030020 Extracellular matrix structural constituent conferring tensile strength 6.59e–06 5 28
 GO:0005539 Glycosaminoglycan binding 3.77e–05 8 240
 GO:0050840 Extracellular matrix binding 0.00011 5 56
 GO:0002020 Protease binding 0.00032 6 138
 GO:0004866 Endopeptidase inhibitor activity 0.00098 6 181
 GO:0004867 Serine-type endopeptidase inhibitor activity 0.00098 5 98
Cellular component
 GO:0031012 Extracellular matrix 3.29e–35 31 527
 GO:0062023 Collagen-containing extracellular matrix 1.88e–31 27 396
 GO:0005576 Extracellular region 2.42e–23 42 4166
 GO:0005615 Extracellular space 1.57e–21 38 3195
 GO:1903561 Extracellular vesicle 3.62e–13 27 2121
 GO:0005788 Endoplasmic reticulum lumen 1.40e–12 14 308
 GO:0005604 Basement membrane 6.24e–12 10 96
 GO:0070062 Extracellular exosome 2.19e–11 25 2099
 GO:0031982 Vesicle 9.84e–11 31 3879
 GO:0005581 Collagen trimer 9.72e–06 6 88

Selection based on p-value. Hit count in genome shows the number of genes in a given pathway, and the hit count in query list shows how many genes in the query list are hit in a given GO terms. The full output table generated by String.dg.org is shown in Supplementary Tables S3 and S4.